Protein

UniProt accession
Q1A0Q2 [UniProt]
Protein name
Lysin A
PhaLP type
endolysin

evidence: GO annotation

probability: 99 % (predicted by ML model)

Protein sequence
MADRFFPMRDGTYTLSSGFGARWGTQHRGLDFAAKDGTPIYAAQAGTVAYIGPAQGFGQWIVIDHPAADGAGTTVYGHMWNAFATGLKAGDRVQAGQLIAYVGANGQSTGPHLHFEVHPTVWRQGSQIDPLPWLHGSRNPGDAPAPAPADPPASAPLGGQRMQDPFTGEVWSPNRSVRQKPAPRWIAIHTQEGGRTARDLCEGWLAKRESQVSYHVAVDDREILKVVAESDRPWAAANANDYAFHVVAAGSYAGWSRGKWLETDASDGKNEDVELTNLAKVCAWWCQKYGIPAEWIGGRGVPWGLDGICGHEDFGAWGGGHHDPGPGFPADELIRRVRALLGGSTPEPLPPAPPVALPGTNPDQYAGVLLYRGRPGQDPRQVRVLQTRLKRAYSKLDVDGIFGPHTEACVRDYQHLHPPLVADGIVGPATAAALGLVF
Physico‐chemical
properties
protein length:438 AA
molecular weight:47075,00000 Da
isoelectric point:6,34075
aromaticity:0,09589
hydropathy:-0,37329

Domains

Domains [InterPro]
IPR011055
3–135
IPR011055 IPR036505 IPR036365
IPR036505
168–335
IPR036505 IPR002477 IPR016047
IPR036366
370–436
IPR036366 IPR011055 IPR002502
IPR050570
7–136
IPR050570 IPR002502
Protein sequence: Q1A0Q2
1 438
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium virus Halo
[NCBI] 		373407 Liefievirus >
Host Mycobacterium
[NCBI] 		1763 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Mycobacteriaceae >
Host Corynebacteriales
[NCBI] 		85007 Bacteria > Actinobacteria > Actinobacteria >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ABE67284.1 [NCBI]
Genbank nucleotide accession
DQ398042 [NCBI]
CDS location
range 23880 -> 25196
strand +
CDS
ATGGCCGATCGTTTCTTCCCGATGCGCGACGGGACTTACACCCTGTCGTCCGGGTTCGGAGCTCGCTGGGGAACACAGCACCGCGGGCTCGACTTCGCCGCCAAGGACGGAACGCCGATCTATGCGGCGCAGGCCGGCACCGTGGCCTATATCGGGCCGGCGCAAGGCTTCGGGCAATGGATCGTGATTGACCACCCGGCCGCGGACGGCGCCGGCACAACTGTCTACGGGCACATGTGGAACGCGTTCGCGACCGGGCTCAAGGCCGGCGATCGCGTCCAGGCCGGCCAACTCATTGCCTACGTCGGCGCCAACGGGCAGTCGACGGGCCCGCACCTGCACTTCGAAGTTCATCCGACCGTGTGGCGCCAAGGCTCCCAGATCGACCCGCTGCCGTGGCTGCACGGCTCCCGGAATCCCGGCGATGCGCCGGCACCCGCGCCGGCCGATCCGCCGGCGTCCGCTCCACTAGGAGGTCAGCGAATGCAGGATCCGTTCACCGGCGAAGTCTGGTCGCCGAACCGCTCGGTACGGCAGAAGCCGGCGCCGCGGTGGATCGCGATTCACACGCAGGAAGGCGGTCGAACCGCGCGCGATCTGTGCGAAGGCTGGCTGGCGAAGCGTGAGTCTCAGGTGAGCTACCACGTCGCCGTCGACGACCGCGAGATTCTGAAGGTCGTCGCCGAGTCCGACCGTCCATGGGCCGCGGCGAACGCCAACGACTACGCGTTTCACGTCGTCGCCGCCGGCAGCTACGCCGGCTGGTCCCGCGGCAAGTGGCTCGAAACCGACGCGTCCGACGGCAAGAACGAAGACGTCGAGCTGACCAATCTCGCGAAGGTCTGCGCGTGGTGGTGCCAGAAGTACGGCATCCCGGCCGAATGGATCGGCGGGCGAGGCGTGCCATGGGGCCTCGACGGCATCTGTGGACATGAGGACTTCGGCGCTTGGGGCGGGGGACACCATGACCCCGGACCCGGATTCCCGGCCGACGAGCTGATTCGGCGCGTACGCGCGCTGCTCGGCGGATCCACACCGGAACCGCTACCGCCGGCGCCGCCGGTGGCGCTGCCTGGCACGAATCCCGACCAATACGCCGGCGTTCTGCTCTACCGCGGCCGGCCTGGGCAGGATCCGCGACAGGTCCGCGTGCTGCAAACACGGCTGAAACGGGCCTACTCGAAGCTCGACGTCGACGGCATCTTCGGGCCGCACACCGAAGCGTGCGTCCGCGACTACCAGCACTTGCACCCGCCCCTGGTCGCCGACGGCATCGTCGGGCCGGCGACCGCTGCCGCACTCGGGCTGGTGTTCTGA

Gene Ontology

Description Category Evidence (source)
GO:0001897 symbiont-mediated cytolysis of host cell Biological process Inferred from Electronic Annotation (InterPro)
GO:0004222 metalloendopeptidase activity Molecular function Inferred from Electronic Annotation (InterPro)
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity Molecular function Inferred from Electronic Annotation (UniProt)
GO:0009253 peptidoglycan catabolic process Biological process Inferred from Electronic Annotation (InterPro)
GO:0042742 defense response to bacterium Biological process Inferred from Electronic Annotation (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.