Protein

Protein accession
1fRDD [EnVhog]
Representative
7ubMN
Source
EnVhog (cluster: phalp2_15061)
Protein name
1fRDD
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
VAKVKFMAVAGPSDVSGKAAQIVKLAKSQVGTLEGKKNGVWDNDQKYSRQVPGLSWSNFQPWCMTFGVWLYWKVGLIKKQLVTASCAASAAYWRKKHRLSKYPMIGGGVYYGYTSPEHYGTVVAYDATTHTAVEGNTTTPGVKGGSEVNGSGVALKRRSRTEWVIGYSEPALPGAVSANPRFKPKKKPKPKPGKKATEPPVKKPSSPSKTPFVDDVLAGKYGTPAVELTAAVRAKVAATGADPKTVEENLNKKVMGA
Physico‐chemical
properties
protein length:257 AA
molecular weight:27513,4 Da
isoelectric point:9,94
hydropathy:-0,43
Representative Protein Details
Accession
7ubMN
Protein name
7ubMN
Sequence length
276 AA
Molecular weight
28937,14240 Da
Isoelectric point
5,08745
Sequence
MSGASAIINSAEAEVGYHEGRDSDGNWNNIQKYSEQVPGLAWSDGEAWCATFMSWLAMVSGNAALYPRTASCAEGVDWFRSIGRFSEYPAVGAQAFYGPGGGSHTGLVVRFDDTHIYTVEGNTNDNGSAQGDGVYRQTRRRRDDYVYGYGYPRFAEGIVSADPAYGGKSSGGSTPTPAPKPVVSLSNVVAAAETDPGASQGHQTHAADVRLVEAALHAEGLLSATYASDGSYGSSTITAYAEWQRKLGYSGSDADGIPGMTSLSKLGASHGFSVKA
Other Proteins in cluster: phalp2_15061
Total (incl. this protein): 176 Avg length: 288,5 Avg pI: 8,31
Protein ID Length (AA) pI
7ubMN 276 5,08745
136a 280 9,66415
139N 280 9,61283
1fPBE 259 4,73693
1fR3Y 274 9,03545
2Vor3 271 8,11059
3LzON 337 9,45385
3PsIb 274 7,87786
3bZ3y 238 9,64913
3e60I 284 6,96593
3eamU 278 9,71140
3ezQy 333 9,34219
3nAy 295 10,06553
4EDVr 295 5,88559
4Es8X 274 9,67743
4F8YT 279 5,55439
4HGAt 283 8,84669
4HUZQ 283 6,03314
4ToUt 265 5,51215
5F0u3 257 8,46168
5innW 369 9,07407
5iqrq 334 9,56577
5nMT4 250 5,06040
5nOlP 278 8,98149
5y9WP 271 6,19502
5yb9b 261 6,59829
6CE1W 489 9,74886
6CGBl 296 8,59636
6CHbK 282 9,39635
6CIqm 277 9,25594
6CLXg 283 6,29540
6CxFv 461 9,09670
6D3zH 284 6,14136
6DChx 281 9,56725
6DJyC 283 6,49331
6DQcY 212 4,70129
6DQjs 278 9,44799
6DVHl 278 9,40080
6DXja 287 9,43380
6DdP3 364 8,55329
6Df7H 465 9,12681
6DfRa 290 9,05118
6Dg8H 281 9,58047
6DkJJ 282 9,54263
6Dkjf 295 9,69013
6DlZa 288 6,35411
6DnVe 280 9,71373
6DoDD 284 6,38009
6DsM9 276 9,34252
6DxcM 280 9,70567
6E0zM 209 5,84256
6E2a8 287 9,67208
6EBRm 280 9,66415
6ECNm 277 9,40080
6ED1J 288 6,35400
6EDhN 297 9,56545
6EFLT 284 5,93055
6EJQS 274 9,70522
6ELRM 287 9,49879
6ER29 461 9,04203
6ERF9 288 6,35411
6ERgV 290 8,31760
6EZQG 480 9,42446
6ErIm 298 9,78896
6EsiM 273 9,40686
6Eu4F 277 9,40080
6EuVz 199 8,95345
6F4li 283 9,48564
6F6N1 282 9,31009
6F89s 276 5,29236
6Fcz0 291 8,79853
6FoKw 288 9,34716
6FrbO 278 9,35103
6GFjD 290 9,67324
6H3KE 287 7,17799
6H3Yk 290 8,93417
6IVVC 267 9,45908
6IXO1 276 5,29236
6J6z9 278 9,44799
6J8IZ 281 9,62405
6KJ4Y 295 9,76272
6KJbM 292 9,46842
6KOp7 265 5,50039
6KlYU 265 4,73210
6Kpxw 278 9,35103
6KrUN 284 5,98398
6KsBI 255 5,31850
6OcWs 265 5,50039
6Od5c 290 9,73739
6OfBA 278 9,44799
6T7Et 299 9,40479
6TaS2 281 9,37984
6Vb0n 281 9,53180
6VbE9 265 6,30557
6VbsB 267 9,84621
6W4TY 244 8,51494
6Xcpp 260 5,97141
726c1 261 9,60026
726dJ 272 9,78432
7277h 268 9,49911
72qIh 263 5,71382
753WD 343 9,84099
7582w 280 9,46584
792fX 343 9,97347
7ANBg 363 9,24762
7B89K 278 9,42710
7BG4O 276 9,34909
7QlL0 368 9,32569
7bxWt 343 9,65815
7df7W 351 9,72713
7ekdA 275 9,92421
7gCSH 227 9,22783
7i5Lm 278 9,82139
7lD3i 283 9,74744
7m75V 265 5,69279
7mzyn 276 9,37649
7o6YS 270 8,91432
7o7MW 278 7,77349
7orU8 253 9,30003
7ouVe 279 9,35238
7p72z 275 9,34671
7rdgg 323 9,26309
7tMwb 282 4,65548
7uORE 343 9,95600
7uPHa 269 8,95519
7uPOC 334 9,31048
7uPlZ 278 4,76410
7ubS0 329 4,61529
7uc5v 343 9,87689
7ucFM 204 4,85225
7ucxz 357 9,33620
7xLXI 264 9,58621
7y7Bb 334 9,98101
7y7Ej 255 9,22525
7ye1e 265 4,66753
7zGus 267 9,38939
7zgCU 279 4,84037
7zgPZ 274 6,13949
7zgr0 285 9,56119
7zhfr 344 9,72314
7ziAT 284 4,60108
7ziFQ 265 6,18388
7zik3 274 5,70751
7zizC 265 5,09047
7zjUi 267 9,55977
7zjqu 280 9,58343
7zk9s 278 5,95891
7zkAS 346 9,62947
7zklS 265 5,68239
7zko9 265 5,23955
7zmk0 253 9,47751
8Jj0a 284 9,81488
8Jj0b 280 9,24433
8Jj0c 284 9,38004
8Jj0h 290 9,72565
8MGQZ 275 9,38216
8MGRR 273 9,32163
8MHs6 282 9,40576
8MKdU 370 9,17425
8MKtm 288 9,60174
8MOMj 279 9,18051
8MP1G 283 9,54353
8MWxO 276 9,38326
8MwPV 285 9,75744
8Mx43 286 9,54856
8eGbW 289 9,65113
8j2MA 267 10,19389
PgA 264 8,35428
QPGa 277 9,81533
bqub 265 5,50050
bu48 201 4,77961
ckq 264 4,85157
A0A2P1N0I7 305 6,11874
A0A7H0XAU4 305 6,59585
A0AA50F1Y0 276 9,70380
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_20992
7zazP
 46 61,0% 172 5.494E-83
2 phalp2_28359
1gpKu
 9 30,3% 264 2.335E-49
3 phalp2_24284
3fAJx
 9 32,5% 280 3.057E-46
4 phalp2_8114
6H1JM
 136 33,6% 276 1.454E-45
5 phalp2_1959
4y5vj
 188 28,8% 281 8.747E-37
6 phalp2_13865
7ucym
 2 27,0% 285 4.916E-35
7 phalp2_1568
7XJtL
 188 27,8% 287 1.245E-34
8 phalp2_14320
3VFlX
 143 27,1% 276 5.849E-34
9 phalp2_29160
7s0gR
 24 27,9% 293 2.746E-33
10 phalp2_40071
41qFE
 139 25,5% 274 1.288E-32

Domains

Domains
Unannotated
Unannotated
Representative sequence (used for alignment): 7ubMN (276 AA)
Member sequence: 1fRDD (257 AA)
1 276 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1fRDD
Method AlphaFoldv2
Resolution 81.13
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7ubMN) rather than this protein.
PDB ID
7ubMN
Method AlphaFoldv2
Resolution 91.27
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50