Protein

Protein accession
1fR3d [EnVhog]
Representative
4RtBC
Source
EnVhog (cluster: phalp2_30410)
Protein name
1fR3d
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAAKLVPTVKTTYTLNQLIGGLVEGWYKKFGVIPEKKQIGVLYAQNALETGGTVSMWNNNIGNVKFVPNKNPELDNGIEYMMLANTWEMVNGKKIIYQPPHQATWFRAFKTLGDGVAHHLDFLRNNRYKKAWTAVEAGSPAEFSHLLKVAGYYTAAEADYTRLMNTYFNKFMKDTTFETAVAALEASIKKEPEPEKKPSIWNKVFDWFGKGSS
Physico‐chemical
properties
protein length:213 AA
molecular weight:24084,3 Da
isoelectric point:9,27
hydropathy:-0,39
Representative Protein Details
Accession
4RtBC
Protein name
4RtBC
Sequence length
250 AA
Molecular weight
29320,17240 Da
Isoelectric point
8,76952
Sequence
MKLHEGYEKRPGSIYFLDCEDTPLTEAEATYYLKEAWRKIYGEYPSLDSLALLWAQSAGETGRWKSLRNYNWGNIKRLKDGYWTSYVAGEVIRGRHQMFYPYHPETYFAAWKTALEGAEGYIRFLSTRQRYRLAWEEIRKGDPVAYCTELKLAGYFTADLGHYTRGVVSLVKEFKNRSEELVTYHPPIKDIEVEVKIERFEKVKSLEAGQEEESKEKEQVALTLKPSIRAHIFNFIINFIKKIASLMKLK
Other Proteins in cluster: phalp2_30410
Total (incl. this protein): 33 Avg length: 241,0 Avg pI: 7,48
Protein ID Length (AA) pI
4RtBC 250 8,76952
16QgB 253 8,71788
1E7Dn 252 7,58706
1MgvO 228 8,85746
1Pvxe 243 5,43497
1lDRm 284 5,60196
1oWKz 226 9,26748
2SfAD 202 5,95328
2bbyn 233 9,25291
2jATr 281 5,15515
2nMOH 248 5,13076
38w3F 272 6,03598
3ja02 274 8,73458
426OA 199 9,23995
42bC1 221 7,73848
4CU9f 257 5,93970
4CX6b 245 9,33659
4DF0X 270 7,62685
4GpRU 242 7,78915
4He9t 244 8,62608
4J2sW 236 6,45267
4LW4D 206 5,01675
4N5R4 211 9,17135
4fxHk 235 6,83929
4roue 222 6,33336
4wdZh 268 9,32769
53vsW 266 8,74122
6Ef7O 202 4,83497
6W30S 239 8,71704
6Xw0o 243 5,71081
8pKH1 240 8,75328
TybK 248 6,91704
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_35889
4RlWa
 4 51,3% 181 7.547E-66
2 phalp2_24286
3gmlB
 71 48,1% 164 1.572E-63
3 phalp2_15603
2jAw8
 1 41,7% 182 2.122E-54
4 phalp2_15372
1IZd8
 1 36,6% 199 1.904E-53
5 phalp2_12780
8asgj
 7 40,9% 171 4.372E-52
6 phalp2_4683
4HkTR
 2 28,9% 173 9.571E-45
7 phalp2_14445
4Ff3O
 1 30,0% 180 5.089E-37
8 phalp2_10542
8aiy3
 19 23,6% 207 5.425E-35
9 phalp2_36001
5zFt2
 8 37,1% 167 2.089E-30
10 phalp2_18002
3ao4M
 1 31,6% 183 2.847E-30

Domains

Domains
Unannotated
Disordered region
Representative sequence (used for alignment): 4RtBC (250 AA)
Member sequence: 1fR3d (213 AA)
1 250 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4RtBC) rather than this protein.
PDB ID
4RtBC
Method AlphaFoldv2
Resolution 89.11
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50