Protein

Protein accession
1fDl5 [EnVhog]
Representative
3YTr
Source
EnVhog (cluster: phalp2_16596)
Protein name
1fDl5
Lysin probability
95%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MTRLLPLLPLLLLLGSAAYRSPVPTLQRVPSRLSCYEIAEIVTGASSVTLKGLCFAESSLGTNLNHPDPHDRGWFGLHETPEIHAERVRLYGEYDADDPTQAAYISGRYYMDNLSKLGSEDRAIAAHKQGPTGVRRDGIDVEYVERVRTGI
Physico‐chemical
properties
protein length:151 AA
molecular weight:16694,7 Da
isoelectric point:5,93
hydropathy:-0,29
Representative Protein Details
Accession
3YTr
Protein name
3YTr
Sequence length
164 AA
Molecular weight
18084,75140 Da
Isoelectric point
8,74515
Sequence
MRDYVARIVFILISILAVVVLSGRCNVFMIKQQMKSMDSMPVAAPPVATVYEQASAASGCPVKIIKGLSFAESSGGKNLKHADPLVKGEFGLNERFHAERAKKFGEYDPEDRLEAATLTGKMYCDNLAFFGDEDKAISAHRKGRHWVIENGLAVAYVARVKENF
Other Proteins in cluster: phalp2_16596
Total (incl. this protein): 13 Avg length: 164,1 Avg pI: 7,14
Protein ID Length (AA) pI
3YTr 164 8,74515
1Kpm9 151 5,49408
1qweV 219 9,64932
2A7tx 185 9,43612
2SSsq 138 6,70901
2ZNMA 164 5,95914
2t5Nl 149 5,56820
3BhGF 169 6,53025
3S7kO 175 7,02185
4jKU5 150 9,81243
4wULa 163 5,48607
6PvGT 155 6,46802
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2323
4KX5A
 21 45,9% 111 7.330E-45
2 phalp2_22474
14TJH
 4 37,8% 103 1.373E-25
3 phalp2_38247
5MYy
 1 30,0% 113 4.818E-25
4 phalp2_25750
4Msco
 20 33,6% 119 2.846E-23
5 phalp2_11131
5sQMW
 3 35,4% 124 2.804E-20
6 phalp2_7270
3WQrb
 2 22,3% 112 5.217E-10
7 phalp2_30151
3ne7w
 5 32,1% 112 2.434E-09
8 phalp2_26388
1vB2c
 5 23,5% 102 4.502E-09
9 phalp2_1437
1BM9o
 11 27,0% 100 7.125E-08

Domains

Domains
Disordered region
Unannotated
Representative sequence (used for alignment): 3YTr (164 AA)
Member sequence: 1fDl5 (151 AA)
1 164 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1fDl5
Method AlphaFoldv2
Resolution 89.37
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3YTr) rather than this protein.
PDB ID
3YTr
Method AlphaFoldv2
Resolution 91.74
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50