Protein

Protein accession
1drxg [EnVhog]
Representative
1LVzM
Source
EnVhog (cluster: phalp2_23911)
Protein name
1drxg
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VTQWYGERPEYYSQFGLRGHNGIDYSAVVGSSVHAVADGVVAWVDIDPKGYGNYIRVWHAPLRIFSLVGHLSETLVKKGDTVTQGQVIAKSGNTGNSTGPHLHYELRIADDAGNYYLVGGMKNGAVDPVSFIAGLDRGGDTPFVPPRYDPTPEFLKALAFVLAHEGGWADNPQDPGGATMKGITIGAYTRWRAAQGLEEPTNDDLRAITDDEVEQIYLGDYWLASGADKLKWPVSLAHFDAAVNSGVGQAATFLAQSGGDFNEYMGQRVTWYTNLGKWDLFGKGWTRRCADVLKEAG
Physico‐chemical
properties
protein length:297 AA
molecular weight:32304,6 Da
isoelectric point:5,22
hydropathy:-0,31
Representative Protein Details
Accession
1LVzM
Protein name
1LVzM
Sequence length
214 AA
Molecular weight
24446,65730 Da
Isoelectric point
9,50904
Sequence
MKTELLVGDSVVVVTPTKLRREPNGTWLETLDFDTKLVITGGPIERAGLIWWQVRNGRTGWIAEQSANRTILIDRLVEGDFGRCLRFVLREEGGLSTDQHDPGGVTLWGISQKAHPYVRVSQLTMERMRKIYHDSYWVPSGAAMLPFPLNLTVFDFAVNAGVGTALLASSVTGTFDAYNEWRRYFYRTLSNYARYGVSWMSRVDRVQRQALLWR
Other Proteins in cluster: phalp2_23911
Total (incl. this protein): 5 Avg length: 249,0 Avg pI: 6,48
Protein ID Length (AA) pI
1LVzM 214 9,50904
1MBAJ 208 6,40618
1XyPf 227 6,28431
6POiG 299 4,95900
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28296
11n7u
 4 32,3% 167 1.418E-37
2 phalp2_23908
1Le4q
 257 31,2% 163 1.691E-33
3 phalp2_38682
IrRH
 2 34,6% 130 9.818E-32
4 phalp2_14059
8aO3S
 400 32,5% 163 1.193E-30
5 phalp2_23756
YFA5
 85 32,2% 158 4.157E-30
6 phalp2_37851
4LyyS
 5845 32,3% 167 5.678E-30
7 phalp2_21492
8pawf
 134 34,7% 141 2.701E-29
8 phalp2_12946
360Ik
 1926 30,3% 165 6.095E-28
9 phalp2_18877
1MrjM
 564 26,9% 167 4.759E-26
10 phalp2_27988
11grN
 1 28,5% 147 1.651E-25

Domains

Domains
GH108
Representative sequence (used for alignment): 1LVzM (214 AA)
Member sequence: 1drxg (297 AA)
1 214 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05838

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1drxg
Method AlphaFoldv2
Resolution 89.31
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1LVzM) rather than this protein.
PDB ID
1LVzM
Method AlphaFoldv2
Resolution 94.57
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50