Protein

Protein accession
1dCP6 [EnVhog]
Representative
1dmAd
Source
EnVhog (cluster: phalp2_4046)
Protein name
1dCP6
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VPWPIAHGPDIHGTYQQITGEPMPEWPLFSHKISEGANSGDKGFPTRWPWMREQGFKYRGAYHWLRSDSRVSDQVANVIRRLDPHGGLLIGEFIQSDWETTPGIHLIGAAGEREFCDRLHQHYQRECTITYSSDWIPDSPEDSDTLGEFYNWLNLTQGNAPLWFANYNSDLTNPRGGWQETTKYGADIWQFTSSYFHPSIISVSGGGFDMNHILNWDTLDRIAGYQAEEIPPEEEDMGMKSILYTVKSAGGDGWFLVSPEHRVRTFGAQAEHIDWPTAGALERSVDIAVFLDMLPHLQPVGDLNAPTEALLGITAAADWKARTSSSSGNQWGMTGTVDLNSQTIDLNPK
Physico‐chemical
properties
protein length:349 AA
molecular weight:39150,9 Da
isoelectric point:4,83
hydropathy:-0,52
Representative Protein Details
Accession
1dmAd
Protein name
1dmAd
Sequence length
349 AA
Molecular weight
39247,98590 Da
Isoelectric point
4,77785
Sequence
VPWPIAHGPDIHGTYQQITGEPMPVWPLFSHKISEGANSGDKGFPTRWPWMREQGFKYRGAYHWLRSDSRVSDQVANVIRRLDPHGGLLIGEFIQSDWETTPGIYLIGAEGEREFCDRLHQHYQRECTITYSSDWIPDSPEDSDTLGEFYNWLNLTQGNAPLWFANYNSDLTNPRGGWQETTKYGADIWQFTSSYFHPSIISVSGGGFDMNHILNWDTLDRIAGYQNEEIPPEEEDMGMKSILYTVKSAGGDGWFLVSPEHRVRTFGAQAEHIDWPTAGALERSVDIAVFLDMLPHLQPVGDLNAPTEALLGITAAADWKARTSSSSGNQWGMTGTVDLNSQTIDLNPK
Other Proteins in cluster: phalp2_4046
Total (incl. this protein): 3 Avg length: 337,3 Avg pI: 4,78
Protein ID Length (AA) pI
1dmAd 349 4,77785
1b2sO 314 4,74420
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26465
1XOf0
 5 34,6% 225 8.725E-27
2 phalp2_35476
lHwL
 1 29,7% 279 9.446E-08
3 phalp2_36673
7XMsp
 15 24,0% 241 1.094E-04

Domains

Domains
Unannotated
Disordered region
Representative sequence (used for alignment): 1dmAd (349 AA)
Member sequence: 1dCP6 (349 AA)
1 349 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1dCP6
Method AlphaFoldv2
Resolution 71.09
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1dmAd) rather than this protein.
PDB ID
1dmAd
Method AlphaFoldv2
Resolution 68.02
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50