Protein

Protein accession
1d8eI [EnVhog]
Representative
5nMV0
Source
EnVhog (cluster: phalp2_7566)
Protein name
1d8eI
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSQKGIDCASKLTATSAKALVKEGITHVGRYLSAAGKGLTKTEVTAITNAGLKIFSIYETNPIKLSYFTVEQGKVDAAAAEKLAKALGQPEGSVIYFTVDYDAQKNDFDEILAYFKAVVAGSKCYKVGAYGSYSVLDYLHSKKVVDYYFQTYAWSKGKENDFAHIYQYKNDTKLAGVAVDLDEIKKNEVGAWGEKANAASEKPAVVKPPATSDPKKTSTYKIKNGDTLWGLEEKNGWEHGTLQKLNPNVDPKKLKEGQAITTPAAVKNSNDSDPKYYTVEKGDNLTKIATKYHTTIQRIVIMNKLKDKNIIIPGQKLRVK
Physico‐chemical
properties
protein length:320 AA
molecular weight:35211,7 Da
isoelectric point:9,25
hydropathy:-0,49
Representative Protein Details
Accession
5nMV0
Protein name
5nMV0
Sequence length
322 AA
Molecular weight
35521,43750 Da
Isoelectric point
5,16635
Sequence
MNMIDCASHLNNVSCGTLVQNGITHVGRYLPTQAWKGLTPDEVAAIKGSGLNLVSIFESGATQQSYFTRDQGVSDANQAYQLAQSLGQPEGTAIYFTVDFDAQVKDFAAILNYFQGLKDTLTSYKIGCYGKFEVVTLIKTKGLADYFWQTYAWSSGQHAKGIHLFQYKNDINQYGLNLDLDQVENADCGAWNQPVNSPFLTTVQVLAQTDIRQEPDHSSFIIKDALPGELYNVIGHLDPDWHEIILDDNGNAGWIDGNKGQNLLDVKNGVPNKTQKYTIQSGQTLTKVAQIYKTSVQNLLILNPNIINPNKVDAGQSIIVPK
Other Proteins in cluster: phalp2_7566
Total (incl. this protein): 10 Avg length: 323,0 Avg pI: 6,81
Protein ID Length (AA) pI
5nMV0 322 5,16635
3XhQJ 316 9,27263
4EqLL 327 8,36950
4EqQ6 327 8,78403
5nMHJ 316 5,43673
5nNaP 320 5,17754
5nNcW 332 4,92194
5nNg4 338 5,66437
8m9QE 312 6,00472
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_33456
7ecbT
 7 34,6% 323 6.339E-73
2 phalp2_6406
boMu
 55 33,8% 239 2.930E-37
3 phalp2_1416
1rulh
 1 27,0% 218 1.590E-33
4 phalp2_8820
2pMjJ
 148 37,6% 194 2.160E-33
5 phalp2_20415
3dkyH
 32 32,7% 220 2.444E-30
6 phalp2_14477
4KyKr
 1 30,1% 199 2.674E-27
7 phalp2_15053
7qmsB
 8 29,8% 211 2.674E-27
8 phalp2_31886
4HC8W
 3 28,1% 330 6.643E-27
9 phalp2_26371
1oyu6
 8 34,1% 205 2.232E-26
10 phalp2_12671
1ZrhB
 6 29,8% 218 6.937E-24

Domains

Domains
Rv2525c
LysM
Representative sequence (used for alignment): 5nMV0 (322 AA)
Member sequence: 1d8eI (320 AA)
1 322 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476, PF08924

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5nMV0) rather than this protein.
PDB ID
5nMV0
Method AlphaFoldv2
Resolution 82.03
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50