Protein

Protein accession
1d6n6 [EnVhog]
Representative
5IYpI
Source
EnVhog (cluster: phalp2_19882)
Protein name
1d6n6
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MIDVDAIPFVQARWYTPANRTEFGHVVLHTMEFWERGDSAEWCQQFFATSDRKGSTHCMVDCDSICRSVLDKDVCWGANGVNRSGLHIEHAGFAAQTAPDWQDDYSTRMLTLSAELTASWCLKYSIPAVFVDAAGLIAGRRGITTHAEAEIAFPYGGHTDPGVEFPMTAYVKRVNELLYPPIITKEVEMFMLVGPLGDNDGVFLVDVATIRWVQSGHELGILRQAGVASVTATVEKIGVMRYARTPFGPSPTSGSFVGLW
Physico‐chemical
properties
protein length:260 AA
molecular weight:28640,2 Da
isoelectric point:5,20
hydropathy:0,00
Representative Protein Details
Accession
5IYpI
Protein name
5IYpI
Sequence length
300 AA
Molecular weight
32218,56750 Da
Isoelectric point
5,44776
Sequence
MSVDLDAIPFVPARWYRVGRLRPIRLLVVHTPEFPELNDGAERLANYFATTDRPASVHVTVDNDSMVRSVADKDTAYGAENANADGLHAELVGYAGQTADEWDDDYSRAVIANAAGLFRAWADRYGIPLRRLTVEQIRAGEPGIAGHADVYQALGGQAFRSDPGAAFPWDRFMAYVTGGGARQGGHAPVYHVVIPGPAPGNPRTFKVDGLQIIAEIAYNAPRGHYAIHQEAWDALEKHGIPIVDGTKAPPFGTEPLIDTLSRYTRGDWRPGTGPGSSGGVTAADVRAVVADVIDGATIRV
Other Proteins in cluster: phalp2_19882
Total (incl. this protein): 2 Avg length: 280,0 Avg pI: 5,33
Protein ID Length (AA) pI
5IYpI 300 5,44776
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_24741
6EXtT
 52 47,4% 198 1.115E-54
2 phalp2_184
5Dm5y
 192 40,6% 192 1.023E-30
3 phalp2_18569
7cxQw
 45 34,4% 186 6.120E-21
4 phalp2_5309
8tCpb
 3 35,4% 189 6.782E-20
5 phalp2_16608
eqCG
 19 33,8% 183 7.048E-16
6 phalp2_28942
5F55F
 4 26,7% 247 2.443E-14
7 phalp2_23125
4E9CJ
 94 30,7% 195 7.929E-14
8 phalp2_590
Z6PR
 9 26,9% 193 4.961E-07
9 phalp2_30839
hrmn
 37 22,4% 276 1.142E-05

Domains

Domains
Ami2
Unannotated
Representative sequence (used for alignment): 5IYpI (300 AA)
Member sequence: 1d6n6 (260 AA)
1 300 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1d6n6
Method AlphaFoldv2
Resolution 81.32
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5IYpI) rather than this protein.
PDB ID
5IYpI
Method AlphaFoldv2
Resolution 77.05
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50