Protein

Protein accession
1bjqs [EnVhog]
Representative
XYcA
Source
EnVhog (cluster: phalp2_38395)
Protein name
1bjqs
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MIISIANVRGLAGTSLAYKRRLWAVSQLVETAVDNIATVIGFETGGTHSPSILNKAGSGACGLIQFMPSTARNLGTSTAMLVAMSAVEQLDYVAKYLLWFGKGKLVTLEDTYMSILWPAGIGKPNDYVLFPRGTIAYKQNAGFDRNADGVTKAEVCHAIRSLYESAQGRIEVEVDDGPRPEVEAPAEDPTPPLTPGDVAERAFKLHFDLTADAFDPAHAGPPPDDVA
Physico‐chemical
properties
protein length:227 AA
molecular weight:24248,2 Da
isoelectric point:4,98
hydropathy:-0,04
Representative Protein Details
Accession
XYcA
Protein name
XYcA
Sequence length
258 AA
Molecular weight
27644,43770 Da
Isoelectric point
6,12425
Sequence
MSREILAIAGLEKTTPEFRREMVAVADRLGLNPSYLAAVMSFETGQTFDPTKTNPYSGCIGLIQFCMPETVGTTRDELRQMSAVEQLEYVERHYKRAAQGRPITSLEDHYLAVLAPACIGFPPSTKMPCVRQAGPPWSRPEGGCPDPVKSCREMPELERHECIYCQNPLDSDGDGYITTHEATAPVRRIVNNAQGKPPIIVDDAPPGPGPGPGNSEPPGLALVTPAGIGLAAAVPLLAGAALGYLAVATIAKKVRRRA
Other Proteins in cluster: phalp2_38395
Total (incl. this protein): 8 Avg length: 232,8 Avg pI: 8,18
Protein ID Length (AA) pI
XYcA 258 6,12425
1DXtq 230 9,36379
1HnTG 219 9,74873
1NH2I 237 7,10751
1cOpv 236 9,03455
4tNSF 217 9,62579
MGMw 238 9,43722
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_7456
4NsYt
 13 34,7% 210 1.746E-44
2 phalp2_38137
6S6gW
 387 37,9% 182 2.899E-43
3 phalp2_38131
6R13H
 1 34,1% 193 4.301E-36
4 phalp2_27366
4D2kq
 9 34,0% 182 1.093E-35
5 phalp2_19338
7nG3N
 9 30,0% 190 2.442E-34
6 phalp2_36417
T712
 4 32,4% 179 3.331E-34
7 phalp2_40137
8mwUh
 2 35,6% 213 6.497E-32
8 phalp2_15256
13Lpd
 2 29,4% 241 6.497E-32
9 phalp2_26552
7YsQE
 123 35,2% 170 1.646E-31
10 phalp2_27181
3ezVK
 6 32,4% 188 5.879E-29

Domains

Domains
Unannotated
Disordered region
Representative sequence (used for alignment): XYcA (258 AA)
Member sequence: 1bjqs (227 AA)
1 258 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1bjqs
Method AlphaFoldv2
Resolution 82.49
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (XYcA) rather than this protein.
PDB ID
XYcA
Method AlphaFoldv2
Resolution 75.68
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50