Protein

Protein accession
1bGo5 [EnVhog]
Representative
2VdfI
Source
EnVhog (cluster: phalp2_3305)
Protein name
1bGo5
Lysin probability
96%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTMAVSLLMTAQVFAQDEIALINKFEQALVNVTDTETKYTTDAVNIRREPNVESEILDVGQRGSSFEIAVVIDGWAMIVTEDGYAYMKTDWFSDEPVTVNSYTDEDLYILTHLLTGEAHTYSDEEQRYVASVVMNRVNHPSYPNTIKGVAFQKGQYACTWDGNYYRTPTDRNWANARYILENGSVFPGDVVYQSGGRQGSGVHLKTSKHYYCYY
Physico‐chemical
properties
protein length:214 AA
molecular weight:24301,7 Da
isoelectric point:4,73
hydropathy:-0,40
Representative Protein Details
Accession
2VdfI
Protein name
2VdfI
Sequence length
217 AA
Molecular weight
24997,73180 Da
Isoelectric point
5,31663
Sequence
MRLLTTIIFSLLFTFTSFAKYEELPQIYKSAIDESQGITNLLYTRDSVNIRNGADTNAPIHTTVDRNTEIEAVTDVGGWVIIIFDGDYRFIRSDLLSTTKTERTYSNDDLYVLSHIIDAEMGVESWEDKLYTGSVVLNRVQGDPYWGNTIREVVFKRGQYQPTWSGSFYRHPSQESINAARYLLENGSQIPCNVVYQAEFKQGKVWKKTKAAYYCYE
Other Proteins in cluster: phalp2_3305
Total (incl. this protein): 36 Avg length: 229,7 Avg pI: 5,03
Protein ID Length (AA) pI
2VdfI 217 5,31663
1bRhl 222 5,96260
1bSex 205 4,93933
1c15g 205 4,81866
1dM4R 203 4,72948
1dbwK 218 6,51144
1k4S1 222 5,16839
1mHlo 205 4,95417
1mz9I 222 5,04136
2mbqP 224 4,63013
3AWmZ 224 4,62740
3bVF2 221 4,66156
3k7pu 231 5,57076
5KALO 219 4,80189
5QGfc 288 5,14088
5Qxpe 291 5,31146
5Sve8 288 5,14088
5WAl8 289 5,19226
5Wmb3 219 4,72175
5Zkpy 288 5,06267
6SxK7 205 4,72198
6SyKd 221 5,41615
6gc5m 291 5,38461
72ALx 181 5,43707
72BqH 222 4,67179
72BtX 225 4,83293
737RH 229 4,52299
7b6th 220 5,01373
7ejiW 195 4,57971
7hB91 228 4,84560
82RzH 204 4,90489
8dTKc 228 4,81889
8pCUV 191 4,32342
8rXOH 287 5,39819
nh6Q 227 5,01368
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_33315
6pAzH
 114 39,4% 142 2.339E-27
2 phalp2_21721
3qDRO
 4 20,0% 175 4.227E-22
3 phalp2_19199
236Zr
 1 28,3% 141 1.377E-11
4 phalp2_30211
45uZT
 1 17,7% 208 2.861E-06

Domains

Domains
SH3_3
Hydro_2
Representative sequence (used for alignment): 2VdfI (217 AA)
Member sequence: 1bGo5 (214 AA)
1 217 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF07486, PF08239

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (2VdfI) rather than this protein.
PDB ID
2VdfI
Method AlphaFoldv2
Resolution 89.21
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50