Protein

Protein accession
1atMo [EnVhog]
Representative
4cqyv
Source
EnVhog (cluster: phalp2_30236)
Protein name
1atMo
Lysin probability
76%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAAMMQGVDYAWGRPDPTAIRQAGYLFALRYLATGGPSVSGKVIGLAERQALHAAGLGVGLVWETYANRPLEGTAAGNADGLAARAQAKALGFPDGFPIFGAVDFNPPSSQYPTIAAYLQAAGFECYANAGTCQYMSDHGICRHFWQHDWGGGTFEGRHLHQRGQINLAGAQVDVNDAYETCCIWFPAQSQPQVHIQSVPAPPVHYQEDNVTGIPVHIPALDDQGNGNIMVPGVAGRVVSVKMNGSDAGGYVPPPRWDSFAIGADEKVKLYGGTPHGELDLTVWVAG
Physico‐chemical
properties
protein length:287 AA
molecular weight:30460,8 Da
isoelectric point:5,47
hydropathy:-0,13
Representative Protein Details
Accession
4cqyv
Protein name
4cqyv
Sequence length
290 AA
Molecular weight
31202,38310 Da
Isoelectric point
5,65312
Sequence
MNVIDYSFSRPPIATFTTNGIVGVIRYVAHDPAKRISKLEFDALRAAGLSVALVWEDAATSWQNGWQRGSSDGAEARRQAREIGFPDNRPIYAAYDSNVGPAQLILAAQYMEGFNTGSNTGPQGAYGTKLLLDDLFACGLIRVGWQTNARGWIGNGPDCVRASLFQRYGQTIPGVPGAYDVNDINQPDWGQTPAPYVKPTTPALPGVTKGLEVDRLEITIATDADGNGWAQTSIPWPKFRGASVQGSAPGRDHAYWPGEAHGNNTSDHVLISVTGAKPDDHVVVFINVAH
Other Proteins in cluster: phalp2_30236
Total (incl. this protein): 11 Avg length: 287,3 Avg pI: 6,28
Protein ID Length (AA) pI
4cqyv 290 5,65312
1EdC5 336 4,94030
1ZezU 240 8,36569
1bm3P 334 5,39228
4FaLv 236 6,69628
4gP4W 282 6,30040
4qCJ0 326 5,34329
5Atn7 287 5,94805
5B3Si 237 9,11565
5B6RK 305 5,84228
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21267
1pbJ5
 3 37,1% 207 4.510E-53
2 phalp2_8820
2pMjJ
 148 36,5% 230 1.180E-47
3 phalp2_20415
3dkyH
 32 32,9% 294 4.374E-45
4 phalp2_29274
idyR
 6 37,6% 199 2.416E-38
5 phalp2_29716
1kpp5
 7 39,4% 213 1.549E-37
6 phalp2_23126
4EcjY
 7 36,0% 205 2.111E-37
7 phalp2_31912
4MY51
 3 29,8% 241 5.343E-37
8 phalp2_7564
5nHVl
 7 38,1% 186 1.394E-34
9 phalp2_27171
3djRo
 6 33,4% 212 2.240E-33
10 phalp2_12671
1ZrhB
 6 29,0% 200 5.650E-33

Domains

Domains
Rv2525c
Unannotated
Representative sequence (used for alignment): 4cqyv (290 AA)
Member sequence: 1atMo (287 AA)
1 290 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF08924

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1atMo
Method AlphaFoldv2
Resolution 82.75
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (4cqyv) rather than this protein.
PDB ID
4cqyv
Method AlphaFoldv2
Resolution 90.72
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50