Protein

Protein accession
1abxM [EnVhog]
Representative
3PKbz
Source
EnVhog (cluster: phalp2_27233)
Protein name
1abxM
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MVKICVDAGHGGKDPGACGNGRQEKDYTLKLALGLGSQLQQHGINVIYTRTDDRFLELYERADISNNNSCDYFISQHVNSGGGYGLETFAYLTSNKGKEFAQAIQNSMVANRVATRDRGVKTANFAVLRKTKCPAILIENHFIDNAADMEFLDANLKKIIELQAKAILDFIGVSSSIRVHESQSTPVPQSKLYCDFASLQREFVNQDFGNISVDNIPGPRTVAAAPTVRQGARGNITKWIQERLIYLGYNVAYGADGIFGEGTRQAVMEFQRNDGLVADGIVGKNTWRKLLGL
Physico‐chemical
properties
protein length:293 AA
molecular weight:32216,1 Da
isoelectric point:8,20
hydropathy:-0,29
Representative Protein Details
Accession
3PKbz
Protein name
3PKbz
Sequence length
255 AA
Molecular weight
28715,56690 Da
Isoelectric point
6,83071
Sequence
MAKKGDKMYKICIDPGHGGKDPGAVNGNYQEKNFNLDIAKKLAFFLESENEFKIIFTRTEDIYVSLDDRCSIANKNKCDIFVSIHINSATNPSANGIETLCFGEFQDRNLAKYIQKALITASKAKDRGVKHTNMLYVITNTKMPAVLVEAGFLSNREDLESLIDDFYLDKIAGAIALGICDYFQIQSKNKVFVTGPQRYKTIDEVPEYAKESVKKMCDTGAIKGDGESLDLSEDMLRLIVIFDRYIKKRQTNDSK
Other Proteins in cluster: phalp2_27233
Total (incl. this protein): 18 Avg length: 233,2 Avg pI: 7,79
Protein ID Length (AA) pI
3PKbz 255 6,83071
1gBT2 246 7,54102
1gGb3 254 8,86796
1gK3c 202 8,27608
2fXMs 225 6,37480
3PFVo 253 8,31766
3e2yK 219 8,79737
3iCbG 236 8,45040
3iKRu 184 7,58496
3nyNZ 255 6,83071
3yRT1 252 7,01481
45soJ 231 8,50120
4hUpY 228 7,93601
4ixk6 188 8,63730
7emF1 288 8,49308
7jgyU 293 8,71156
A0AAT9V7K2 95 4,79826
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_24413
4m1OU
 1246 49,7% 185 2.923E-64
2 phalp2_33525
85Tz
 32 46,8% 177 5.370E-55
3 phalp2_24180
2sCjK
 13 46,2% 188 1.810E-48
4 phalp2_13925
foQI
 206 39,5% 187 1.907E-43
5 phalp2_26616
7oxe5
 7 34,2% 228 1.907E-43
6 phalp2_26211
jfKR
 112 40,9% 176 8.076E-42
7 phalp2_18497
6MPko
 7 38,4% 177 5.250E-41
8 phalp2_26054
7b6zX
 8 37,2% 180 4.658E-40
9 phalp2_9307
7sfyx
 22 39,5% 187 4.990E-38
10 phalp2_17753
7uM5Y
 14 33,3% 201 9.302E-38

Domains

Domains
Ami3
Unannotated
Representative sequence (used for alignment): 3PKbz (255 AA)
Member sequence: 1abxM (293 AA)
1 255 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3PKbz) rather than this protein.
PDB ID
3PKbz
Method AlphaFoldv2
Resolution 93.74
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50