Protein

Protein accession
1YPn4 [EnVhog]
Representative
474YH
Source
EnVhog (cluster: phalp2_34359)
Protein name
1YPn4
Lysin probability
88%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MRTLLSRLSAVLAISLTLSVTPLISGEIAGAASQGACTTWVKMIDISSNQPHPINWAKVVKSGVAGVYVKATENTTYTNPYFSKDAAQAVANGIPYGGYDFARPDKSDPIADAKYFVAAGGADGQLPPALDLETLGKTTIDTLRWAFAWLNEVSTLTGTYPIIYTGSYYPWSSNASLGSWKLWLAAYPHGYQPTQSACKLPLPVVSAPWVRQGWSIWQYSSRGFVPGIFYSVDLDAATTAWFQYVTNADVSAPTSNGSVVPIYAYGSKGTAVTYIQRTLYGLGLLPYVEITGIFDIFTVNALKKYQALMGIPANCQWDSASVAANIWYKANHRPVENTTNYPTLALKSAGAKVVWVQQRLNSARFYTPVTGIYTKETRNEVAQFQKAHHLPASGVVNLATWRVLWSA
Physico‐chemical
properties
protein length:407 AA
molecular weight:44330,8 Da
isoelectric point:9,14
hydropathy:0,01
Representative Protein Details
Accession
474YH
Protein name
474YH
Sequence length
355 AA
Molecular weight
39184,16210 Da
Isoelectric point
9,42974
Sequence
MRSFKIRPIFLAVTIAFTSLFAVVPSRVAVAQTPCATWLRVIDISSNNRHPLGWTQLVKAGIAGAYIKNTEGVNYTNPYWTSDARDATRAGVPWGVYQFAQPGKTDAVASAKYFLAQGGNNGQLPPALDLEVTTLSPEATARWALLWLQTVQAMTNRAPIIYVGAFFPASQYPFLAPYDLWLPAYPNGYQPVANVCSLPSPRLPAPWRNTGWQMWQFTSVAEPNGTHNNTDLSVAESSWFTKWTGAGYNQSNNGKPANPLYTTGSHGIKVVQIQTLLIQQGLLPKGSNDGVFGLQTKQALEVYQQRIGIKGDGVWSNETQTASDFFLKYHRTMKQDELCKSMGVEMKTKKADIKL
Other Proteins in cluster: phalp2_34359
Total (incl. this protein): 38 Avg length: 398,6 Avg pI: 8,58
Protein ID Length (AA) pI
474YH 355 9,42974
12QJK 358 9,08703
1YBl1 401 8,53292
1YJTI 414 9,74061
1YNPq 360 9,66479
1ZXzh 387 9,96825
1Zbts 431 6,81183
1hCxZ 419 5,95607
20fXi 380 9,02282
20fa6 280 4,85834
20hPG 454 6,40669
2DOV0 362 9,42407
2E3FT 379 9,08471
2E9MD 387 9,93266
2EHNN 419 6,03030
2F5Zf 414 5,95101
2FCxO 414 9,74061
2FtFG 427 9,55075
2ar27 406 9,70470
2jflg 414 9,82255
31YzZ 364 9,69671
3b15H 415 9,81494
47CDT 416 9,68987
47it3 414 9,72913
4b32C 406 9,78284
4cF4c 410 7,01378
4cxdm 407 9,07317
4djoP 454 5,89485
5ovk8 355 8,86719
7F5Hn 402 9,39486
7FDPN 357 4,34139
7FEly 427 9,33646
7FGq1 387 9,53431
7rMg 416 9,56654
7rd2 431 6,80899
CbcF 406 9,70470
mBHX 413 9,82313
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_24068
8akZZ
 1 34,6% 312 2.169E-72
2 phalp2_11028
4SVWb
 1 26,6% 315 5.129E-47
3 phalp2_1549
3LwuQ
 17 27,1% 291 3.365E-42
4 phalp2_39458
4VDTp
 155 23,4% 324 4.543E-38
5 phalp2_30061
2NCcc
 23 29,4% 231 3.594E-28
6 phalp2_36673
7XMsp
 15 24,5% 309 6.563E-28
7 phalp2_37341
8v6XY
 562 27,1% 236 1.619E-27
8 phalp2_12276
79roT
 46 29,1% 233 9.828E-27
9 phalp2_17042
7nSW4
 41 24,4% 229 1.327E-26
10 phalp2_5862
5yfd0
 6 24,1% 240 5.946E-26

Domains

Domains
PG_1
Representative sequence (used for alignment): 474YH (355 AA)
Member sequence: 1YPn4 (407 AA)
1 355 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183|PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (474YH) rather than this protein.
PDB ID
474YH
Method AlphaFoldv2
Resolution 89.93
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50