Protein

Protein accession
1YIB7 [EnVhog]
Representative
2ScQK
Source
EnVhog (cluster: phalp2_4437)
Protein name
1YIB7
Lysin probability
63%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MLTKGIDISHYDPQVDWIKAKSDGVQFVYIKCTQGSGFVDPLCATHGHNAKSADVKIGYYHFANPETEPVAQANFFVSQLAKLPAYDMIPVLDIETNKSNLGPLAMETWIIAFNGILNKTGHKLMIYSYQPFLEQFLPPNHTLGNLPLWLAQYRNVTAPSVPKGWNGVDLWQYSQTGVVNGVSAKTVDMDKAFTDRFFINAII
Physico‐chemical
properties
protein length:203 AA
molecular weight:22655,7 Da
isoelectric point:6,27
hydropathy:-0,08
Representative Protein Details
Accession
2ScQK
Protein name
2ScQK
Sequence length
195 AA
Molecular weight
21264,76230 Da
Isoelectric point
5,02982
Sequence
MTLYGVDVSQYQPHVDWSALVRDGYGSFAYARCCEGTTLDPLHAVHVLNARAAGVPIGSYQFGHPSQDCATLVAAFLAHAHLIELRPVIDMETLSDGHVPTNAASWADDWCERVKAATGLEPIIYASTSYWRTMLVLKPEIGGPLGWDWWAAQFGGTRPPLSIAWQERGNVALPHQVGLWDVDSVDAPDVGALRV
Other Proteins in cluster: phalp2_4437
Total (incl. this protein): 2 Avg length: 199,0 Avg pI: 5,65
Protein ID Length (AA) pI
2ScQK 195 5,02982
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_39912
1jXPT
 300 33,1% 172 3.285E-23
2 phalp2_36157
6TiaL
 25 31,4% 159 8.364E-23
3 phalp2_20360
2RVWF
 69 30,5% 170 1.738E-18
4 phalp2_7474
4TFQX
 5 34,3% 128 4.402E-18
5 phalp2_5615
4g2xP
 40 27,8% 219 1.114E-17
6 phalp2_29268
hFI3
 21 26,3% 163 7.127E-17
7 phalp2_20361
2Sd5N
 42 26,6% 139 1.801E-16
8 phalp2_26909
4r87F
 36 29,1% 206 5.356E-15
9 phalp2_36923
4by0
 1 27,5% 200 3.393E-14
10 phalp2_30706
7cHI2
 66 25,5% 180 5.376E-13

Domains

Domains
GH25
Representative sequence (used for alignment): 2ScQK (195 AA)
Member sequence: 1YIB7 (203 AA)
1 195 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1YIB7
Method AlphaFoldv2
Resolution 95.98
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (2ScQK) rather than this protein.
PDB ID
2ScQK
Method AlphaFoldv2
Resolution 97.07
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50