Protein

Protein accession
1RMoD [EnVhog]
Representative
4PhIq
Source
EnVhog (cluster: phalp2_7458)
Protein name
1RMoD
Lysin probability
92%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MIKKNKYQRPKEKLEISVIHVFTACIMAISLFAFVSDTHAAEIKTNSKSSFIYSLNSCIKDLNKTIPKSKQIPSELIVAQAVIETAWGKSRISHEANNLFGIRTWNQEDKHLIPLPKSVDPTFKTVWPGWGVKVYETKCDSVKDYMRIINEVFAYAEFREMRGDGITDALVLARTLKRWAAEDHYTDLIEDVIKYNLRGKYDL
Physico‐chemical
properties
protein length:203 AA
molecular weight:23361,7 Da
isoelectric point:8,98
hydropathy:-0,28
Representative Protein Details
Accession
4PhIq
Protein name
4PhIq
Sequence length
212 AA
Molecular weight
24194,43260 Da
Isoelectric point
5,80789
Sequence
MKGDDDQFGFQKSLDGNEENWVKGRVYKGKKPWLSKYQGKDFSKKKTKIDIDVISFFTAVVIVMSLLFFCPLSHAVEIKTNTKPLFVYSLNSCIEDLNKDIPTENQIPSELIVAQAVIETGWGVSRFANEANNLFGIREGLKVFKTKCDSVADYIRIINEVPAYAEFREMRQDGVTDALLLARTLKRWAADPNYTDLIEDVIQHNIRGVYEL
Other Proteins in cluster: phalp2_7458
Total (incl. this protein): 10 Avg length: 184,8 Avg pI: 7,39
Protein ID Length (AA) pI
4PhIq 212 5,80789
1SrKu 160 5,71808
3jfc9 203 8,82464
3jgot 196 7,70142
4Pgay 169 5,08268
6VUrz 166 9,23821
8FqwS 203 8,98194
Cuzd 168 5,74394
Vdvq 168 7,86677
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2807
8wEtz
 388 54,1% 157 3.104E-48
2 phalp2_27854
8z2UL
 887 44,8% 154 1.612E-36
3 phalp2_9899
2Cydi
 49 40,3% 156 8.782E-29

Domains

Domains
GLUCO
Representative sequence (used for alignment): 4PhIq (212 AA)
Member sequence: 1RMoD (203 AA)
1 212 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4PhIq) rather than this protein.
PDB ID
4PhIq
Method AlphaFoldv2
Resolution 84.28
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50