Protein

Protein accession
2VydY [EnVhog]
Representative
2VydY (this protein)
Source
EnVhog (cluster: phalp2_3307)
Protein name
2VydY
Lysin probability
98%
PhaLP type
VAL
Probability: 98% (predicted by ML model)
Protein sequence
MALNYPGYSVPQPTDLTLLDVYGQWNKGVEQGKADRYEREAPDAFAAYVDSLYGGGAASGGAPPASLDLVALETARRGGGASGAPPVVGDVATDFFSATRNSESGGNPNAKNPNSSAEGLYQFLEPTWNGLMASHPELGLTPDGRSDPAQQERAMRVFTADNARTLKSAGIGIDPGSLYAAHFLGAGGASKVLQGDPNSPVSAYVSPEVITANPQLGNMTVGQFREWAASKGGNSAGGYAAPTANVVSSAPAAGGLPSRDVMLRLFKNPETRPLAIELAKSAQAGRAAKPIEINNRLVDPQTGRVVADFSDESKPLTNLAKLRADLKAGRISQPEFDAAVAKETAINGGTSLRVNPETGEVEFQQGGPGGQGIKITEGQSKDINYYTRGIDANKQLLTMDEQLTSLPADLSTKFNPLGLGNYMRTPEFRQAKVAADTFLTAILRKDTGAAITTQEFDIYGPMFLPIPGDDPETIKVKRRAREVALLGIRSGLGTAEAIAEANRIALGVESPTPILDAEKDGGAPPAGYTGDPELWEFLSPEERALWPN
Physico‐chemical
properties
protein length:548 AA
molecular weight:57597,6 Da
isoelectric point:4,93
hydropathy:-0,37
Other Proteins in cluster: phalp2_3307
Total (incl. this protein): 7 Avg length: 567,7 Avg pI: 4,87
Protein ID Length (AA) pI
4fhCi 525 5,02141
4fhVS 538 4,84447
4gEVA 585 4,72619
6wXj9 520 4,88886
8ipUa 738 5,06853
8t7hu 520 4,64621
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_35818
4Cb1M
 1 24,1% 560 1.461E-34
2 phalp2_20152
40vYY
 4 26,9% 453 8.365E-34
3 phalp2_29767
1H2mi
 7 25,8% 519 8.724E-30
4 phalp2_25950
6wXAi
 1 25,4% 421 1.614E-20
5 phalp2_36635
29ptg
 37 27,4% 489 2.834E-20
6 phalp2_489
8CN8N
 3 23,4% 440 6.978E-12

Domains

Domains

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2VydY
Method AlphaFoldv2
Resolution 68.61
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50