Protein

Protein accession
D6PGG7 [UniProt]
Representative
swmz
Source
UniProt (cluster: phalp2_28232)
Protein name
NlpC/P60 domain-containing protein
Lysin probability
100%
PhaLP type
VAL
Probability: 91% (predicted by ML model)
Protein sequence
MVDCRALVGQEWDYGKQDCYTLVRQYYEQLGVQLRDFERPEDLGTTDSIFLKHAERLGFQQVEFEQRQKNDVLIMRLGTRTPMHAAIYVGGDRILHQRMNSISAVEPLRQYYWKRTVAVFRHATCLAGR
Physico‐chemical
properties
protein length:129 AA
molecular weight:15199,2 Da
isoelectric point:8,49
hydropathy:-0,51
Representative Protein Details
Accession
swmz
Protein name
swmz
Sequence length
206 AA
Molecular weight
23239,24860 Da
Isoelectric point
10,30335
Sequence
VRFAGEWFLLAMPQHRGRSRAGFRAAPKGLCGGTICRTNPGGNPFASNGRRCQPARSKSLQTPRVALAHLVNARKPVVNYQSLIGRQWAYGVNDCFSLVREFFGLQSIRLPDFDRPEDLETSPSIFLEQAERIGFRQVAYANRQPGDVVIMRLGTRFPMHAAVLVDYDRILHQRQDSLSTEEPLTRYYVERIAAVFRYGANRQAAG
Other Proteins in cluster: phalp2_28232
Total (incl. this protein): 3 Avg length: 178,0 Avg pI: 7,95
Protein ID Length (AA) pI
swmz 206 10,30335
A0A6M3H4F5 199 5,05915
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_37860
4MGrx
 1 25,2% 182 3.665E-11
2 phalp2_19663
4wOPw
 7 24,4% 131 2.439E-06
3 phalp2_19457
33GhY
 30 27,8% 133 3.280E-06
4 phalp2_4350
2U0xb
 58 18,9% 185 8.777E-04

Domains

Domains [InterPro]

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage MedDCM-OCT-S12-C473
[NCBI] 		743597 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
GU943045 [NCBI]
CDS location
range 5059 -> 5448
strand +
CDS
ATGGTTGACTGTCGAGCCTTAGTCGGTCAGGAATGGGACTATGGCAAGCAAGATTGCTACACACTGGTTCGACAGTACTACGAGCAGCTCGGTGTGCAGTTGCGAGATTTTGAGCGACCGGAAGATCTAGGCACGACAGACAGCATTTTTCTGAAACATGCAGAACGACTCGGGTTTCAGCAGGTCGAATTTGAGCAACGGCAAAAAAACGATGTGTTGATTATGCGTCTAGGCACGAGAACGCCTATGCACGCTGCGATTTATGTGGGTGGTGACAGAATTTTGCACCAGCGAATGAACAGCATTAGTGCGGTTGAACCGTTGCGGCAGTACTATTGGAAAAGGACTGTGGCAGTGTTTCGTCATGCAACTTGTCTTGCTGGCAGGTGA

Gene Ontology

Description Category Evidence (source)
GO:0001897 symbiont-mediated cytolysis of host cell biological process None (UniProt)
GO:0008234 cysteine-type peptidase activity molecular function None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi0001d1c33d_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (swmz) rather than this protein.
PDB ID
swmz
Method AlphaFoldv2
Resolution 75.05
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50