Protein

Protein accession
D6PG05 [UniProt]
Representative
3xgBR
Source
UniProt (cluster: phalp2_22672)
Protein name
Lysozyme
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MDVGAADIRRWHVDERGWDDVGYHWIVKRSGQLEPGRDQRLQGSHALAVNSKSIGVCLVGRGDNFTEDQMYTLHNVIQTIKDMHPEIEVIGHSDVEPKKPHCPGFNVKEWYQDEFIG
Physico‐chemical
properties
protein length:117 AA
molecular weight:13394,8 Da
isoelectric point:5,55
hydropathy:-0,66
Representative Protein Details
Accession
3xgBR
Protein name
3xgBR
Sequence length
51 AA
Molecular weight
6009,66970 Da
Isoelectric point
4,85561
Sequence
EDQMYTLHNVIQTIKDMHPEVEVIGHSDVEPKKPHCPGFNVKEWYQDEFIG
Other Proteins in cluster: phalp2_22672
Total (incl. this protein): 5 Avg length: 73,2 Avg pI: 4,73
Protein ID Length (AA) pI
3xgBR 51 4,85561
13R2B 68 4,55561
2OhgZ 74 4,62927
3JEpL 56 4,05003
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2298
4Fmu3
 19 40,4% 42 7.362E-09
2 phalp2_5114
1MHVU
 6 31,1% 45 1.310E-07
3 phalp2_499
8FzyL
 2 30,6% 49 2.341E-06
4 phalp2_25760
4OCuh
 74 32,6% 46 2.888E-04

Domains

Domains [InterPro]
Unannotated
Representative sequence (used for alignment): 3xgBR (51 AA)
Member sequence: D6PG05 (117 AA)
1 51 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage MedDCM-OCT-S08-C582
[NCBI] 		743580 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
GU943037 [NCBI]
CDS location
range 14307 -> 14660
strand +
CDS
ATGGATGTAGGAGCTGCTGATATTAGAAGATGGCATGTAGATGAAAGAGGCTGGGATGATGTGGGTTATCATTGGATAGTAAAAAGATCTGGACAGTTGGAACCTGGCCGAGATCAAAGGCTACAGGGTAGTCATGCCCTTGCAGTTAATAGTAAAAGTATAGGTGTGTGCCTAGTGGGAAGAGGCGATAACTTTACAGAAGATCAGATGTACACACTTCATAATGTAATACAAACAATAAAAGATATGCACCCAGAAATAGAAGTCATTGGACATTCAGATGTGGAACCAAAGAAACCACATTGTCCAGGATTTAATGTAAAGGAATGGTATCAAGATGAGTTCATCGGCTAA

Gene Ontology

Description Category Evidence (source)
GO:0001897 symbiont-mediated cytolysis of host cell biological process None (UniProt)
GO:0008270 zinc ion binding molecular function None (UniProt)
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity molecular function None (UniProt)
GO:0009253 peptidoglycan catabolic process biological process None (UniProt)
GO:0042742 defense response to bacterium biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi0001d1bfac_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3xgBR) rather than this protein.
PDB ID
3xgBR
Method AlphaFoldv2
Resolution 94.45
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50