Protein

Protein accession
D6PEQ5 [UniProt]
Representative
3CkmE
Source
UniProt (cluster: phalp2_18052)
Protein name
Peptidase M15A C-terminal domain-containing protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 81% (predicted by ML model)
Protein sequence
MARRVKAITGLTTELKAQLRLAKDPNLLVFTPVGGLGPVDIVTLNMTTGEYTAYDVKSKNYRKVNSYTAPDGYKETLKDPLYLEEQPKNKEIRSENNIRMKLSQNFTLQELTKSDTAIRLGIANEPNSDQIAKLQNLCETLLQPVRDKFGPVTVTSGFRSVDLCVKIGSSINSQHAKAEAVDFEVSGTDNADLAYWIKDNIEGWDQMILEFYTIGEPNSGWVHCSIADKPRKQFLRAFKEDGKTKYKPIIGDIRCG
Physico‐chemical
properties
protein length:256 AA
molecular weight:28697,4 Da
isoelectric point:8,21
hydropathy:-0,48
Representative Protein Details
Accession
3CkmE
Protein name
3CkmE
Sequence length
254 AA
Molecular weight
N/A Da
Isoelectric point
5,32055
Sequence
MKLTPNFSVRELTKSQTAERKGIDNTPTEEHIENLKLLCENILQPIRDEWGVVSVSSGYRSPSLCQAIGSSEKSQHARGQAADFECHTVDNKQLFEWVTNELDYDQAILEFYTGTPESXXXSIRRDLAMKNSLLVHKHLIIRAEASKPPTDEEQLQNWMKEFIESINMKVFMGPYVKYCNMPGNRGITAVAIIETSHIAMHIWDEPKPALLQMDVYSCGEFDHTDICKKLMNDFNIHKIEYKYLNRETGLVDID
Other Proteins in cluster: phalp2_18052
Total (incl. this protein): 11 Avg length: 214,2 Avg pI: 6,79
Protein ID Length (AA) pI
3CkmE 254 5,32055
3Isgs 289 5,86029
A0A7S5Y9A8 158 5,47214
A0A7T3U7K7 158 7,65595
A0A7T3PH93 158 6,08390
A0A7T3PHQ0 158 5,74207
A0A7T3U729 157 5,70342
D6PEF1 256 8,21123
D6PEK2 256 8,21123
D6PF22 256 8,21123
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_35427
8B2B5
 2 36,9% 173 3.768E-36
2 phalp2_28400
1wHxm
 2 25,7% 171 2.075E-14

Domains

Domains [InterPro]
PET_M15
AdoMet_dc
Representative sequence (used for alignment): 3CkmE (254 AA)
Member sequence: D6PEQ5 (256 AA)
1 254 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF02675, PF08291

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage MedDCM-OCT-S04-C1227
[NCBI] 		743539 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
GU943017 [NCBI]
CDS location
range 3523 -> 4293
strand +
CDS
ATGGCTAGAAGAGTAAAAGCTATTACAGGCTTAACTACAGAATTAAAAGCACAACTTAGACTTGCTAAAGATCCTAATCTTTTAGTGTTCACGCCAGTTGGTGGTCTTGGTCCAGTAGATATTGTTACTTTAAATATGACAACAGGTGAGTATACTGCTTATGATGTTAAGTCTAAAAATTATAGAAAAGTTAACAGCTATACTGCACCAGATGGATATAAAGAAACCTTAAAGGATCCTTTATATCTAGAGGAGCAACCAAAGAACAAAGAAATTAGGAGTGAAAATAATATACGAATGAAATTATCACAAAACTTTACGCTTCAAGAACTTACCAAATCAGACACAGCAATAAGATTAGGTATAGCTAATGAGCCTAACTCAGATCAGATTGCTAAACTACAAAACCTTTGCGAGACTTTACTTCAACCAGTTAGAGATAAGTTTGGTCCAGTAACTGTAACATCTGGATTTAGATCTGTAGATCTTTGTGTTAAGATAGGCAGCTCAATCAATAGCCAACACGCTAAAGCTGAAGCTGTAGATTTTGAAGTTTCAGGCACAGATAATGCTGATCTTGCTTACTGGATTAAAGATAATATAGAAGGTTGGGATCAAATGATCCTTGAATTTTATACCATTGGTGAGCCTAATAGTGGATGGGTTCATTGTAGTATAGCAGATAAACCTAGAAAACAATTCTTGAGAGCTTTCAAAGAAGATGGTAAGACAAAATACAAACCAATAATTGGAGATATAAGATGTGGTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi0001d1bdcb_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3CkmE) rather than this protein.
PDB ID
3CkmE
Method AlphaFoldv2
Resolution 86.68
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50