Protein

Protein accession
A0A976R5G1 [UniProt]
Representative
1RdtJ
Source
UniProt (cluster: phalp2_26450)
Protein name
Peptidase M15A C-terminal domain-containing protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 92% (predicted by ML model)
Protein sequence
MASDYISEHFKASEFVVTNTGLPNILPDDLIVNRDLLCTQLQVLRDFIGKPIIINSAFRSPAVNKAVGGATHSAHLECRAADIRCPGLSYNDFLCSILNSPAAFSRIILEPFWFHVEIDYGNHDLFNELRRVELPDSSGFPGSFTVYYLLNTRTMINLSKR
Physico‐chemical
properties
protein length:161 AA
molecular weight:18079,4 Da
isoelectric point:5,91
hydropathy:0,04
Representative Protein Details
Accession
1RdtJ
Protein name
1RdtJ
Sequence length
271 AA
Molecular weight
31353,66950 Da
Isoelectric point
8,85314
Sequence
MSKDFINLLSSKIDNIPNFPVLKSLAIAQACLESRYGQKHFYNNIFGIKCWNVNAYAGCRIGRTSEFIDGSYQHNLSLAFQVYDSFDDSLKDYARLMNIKRYERVRNAKNYIEATQAVKDCGYATSLAYVANLRRIIEQYKLYELDNKMEDYYITPNFKMSEFICKDGTEVPEDLKIYMEIVATELQMLRNEIDKPIIITSAYRTPEYNKKVGGKPASYHLKMQAADIRVSGMKPYDVAVYAARYTNFGGFGIANSFLHLDLRPKFLIFKY
Other Proteins in cluster: phalp2_26450
Total (incl. this protein): 6 Avg length: 263,8 Avg pI: 8,62
Protein ID Length (AA) pI
1RdtJ 271 8,85314
2Q3ir 275 8,60912
45CiI 284 9,43193
4iuB5 294 9,55094
4uBoA 298 9,33800
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28304
13qfb
 5 35,6% 275 5.735E-35
2 phalp2_21235
1gIfg
 3 33,3% 216 6.335E-25
3 phalp2_28037
6Y9Dr
 202 20,0% 349 9.268E-14

Domains

Domains [InterPro]
GLUCO
PET_M15
Representative sequence (used for alignment): 1RdtJ (271 AA)
Member sequence: A0A976R5G1 (161 AA)
1 271 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01832, PF08291

Taxonomy

  Name Taxonomy ID Lineage
Phage Dipodfec virus UA23Rod_920
[NCBI] 		2929334 Petitvirales > Microviridae >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
OM869611 [NCBI]
CDS location
range 3584 -> 4069
strand +
CDS
ATGGCATCTGATTACATTTCCGAACACTTCAAGGCCTCAGAGTTTGTTGTTACAAACACTGGTCTTCCTAATATACTCCCCGATGATTTGATTGTCAATCGCGATTTGCTTTGCACTCAACTTCAGGTTCTCCGCGATTTTATCGGTAAGCCTATAATCATCAACTCCGCTTTTCGTTCGCCTGCCGTCAATAAGGCTGTAGGCGGTGCCACTCATTCCGCTCATCTTGAATGTCGGGCCGCTGATATTCGTTGTCCTGGTCTTTCTTATAATGATTTTCTTTGCTCTATTCTTAATAGTCCTGCGGCTTTTTCTCGTATCATCCTTGAGCCTTTTTGGTTTCATGTTGAAATTGATTATGGCAATCATGATTTATTTAATGAGCTTCGCAGAGTTGAGTTGCCTGACTCTTCTGGCTTCCCTGGTAGTTTTACAGTCTATTATCTCCTCAACACTCGCACAATGATTAATCTGTCGAAGCGATGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1RdtJ) rather than this protein.
PDB ID
1RdtJ
Method AlphaFoldv2
Resolution 94.50
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50