Protein

Protein accession
A0A8S5V4Z4 [UniProt]
Representative
5Ryc5
Source
UniProt (cluster: phalp2_5910)
Protein name
PlyB like endolysin
Lysin probability
100%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MNSGSKVIKIAREELGYLEKASNAQLDSKTANAGDKNFTKYARDIDAIPHFYNGKKQGYPWCTVSLAWWFIKAFDVAEAKRLLLLPEDSLGAGVYYLKRYFKAAGQLGSTPKVGAVVFFGDDHTGIVTEIVGKGFRTIEGNTSPQSGVVINGGGVYEKEYASVKSSYTFGYPDYQENDEDAPAEKPKIYLSPAYHKANQCCYKRPDGQQCFETLENNEFLDILQPMLERCGFDIMRGPRRTPMSDEYGPDYMYRAIKESNEWGAKVHYVSHTNGSTNGPTGNGTVKGFLSMHHPSSANGKKLAELMVKYRKAIYPHGCRTATRSDLHELDDTNAYAVYQEHVYHDNPEDAAWFHEHMEECAVADCKALCEFCGLEYVEPEKPQEPETPEQPTVTETYTVKVTRSADGKSGTWEIVK
Physico‐chemical
properties
protein length:416 AA
molecular weight:46606,6 Da
isoelectric point:5,69
hydropathy:-0,64
Representative Protein Details
Accession
5Ryc5
Protein name
5Ryc5
Sequence length
420 AA
Molecular weight
46794,75780 Da
Isoelectric point
5,41235
Sequence
MSAVSKVIKIAAAEIGYPEKATNSNLDSPTQNAGYNNYTKYARDIDAIPHFYNGPKQGYPWCTVSLAWWFIKAFDVDEAKRLLLLPEDSLGAGVYYLKRYFRDAGQFGTTPKVGALVFFGDEHIGIVTTVEGNGFRTIEGNTSPAKGVVANGGSVCAKSYSSVKSSWTFGYPAYTEVDEDKPKVYLSPAMHRQNECCYPREDGQQCYEALENNEYIDILEPILNRCGIDTLRGYRRTPMDGEDGEQIMYNNINAGNAWKPDVYYVSHTNASTNGKTGSGTAKGFSSMYYPGSGNGQKLAKLMVQHRSEIYPYSCKTVARSDLHELSDTDAPAVYQEHVFHDNPEDAKWFHEHMKECAEADARALCEYLGIAYVDEPKTEPEKNILYRVQVGAFRVKANAEAQLEKLKAAGFDGFIVEVEK
Other Proteins in cluster: phalp2_5910
Total (incl. this protein): 40 Avg length: 422,6 Avg pI: 5,68
Protein ID Length (AA) pI
5Ryc5 420 5,41235
1ksCL 419 5,12400
3B5cv 419 5,76469
3o4Ce 425 6,80200
3seTF 424 5,58326
3skU0 419 5,63118
3uXiY 424 5,44514
3vsGf 419 5,76469
3y1Ng 419 5,67989
5BNq 419 5,04090
5N4mc 419 5,79533
5NITi 419 5,59832
5OFxZ 419 5,54660
5VLuQ 419 5,54899
62oNi 424 5,85074
64VW9 421 5,85074
65SO3 419 5,59832
65yBF 419 5,67989
66JaV 418 5,81442
67RYy 419 5,79766
67ezh 420 5,87274
68X7d 420 5,41235
68xay 416 5,68449
691w3 419 5,59832
6aZxS 419 5,67989
6bIw4 424 5,39171
6ciup 424 5,51522
6hEOh 418 5,86285
6kQvL 424 5,51761
6ke99 469 5,89730
6lWYf 419 5,76469
6owNo 419 5,76634
6r2Gc 420 5,97806
6rvu8 418 5,81442
6slao 424 5,52847
6vDzn 420 5,98346
80hDY 416 5,60355
850qw 424 5,65988
8lQPU 471 5,71814
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23413
6e4A5
 8 28,3% 399 5.014E-27
2 phalp2_2516
5R51w
 7 24,9% 349 2.004E-18

Domains

Domains [InterPro]
CHAP
Ami3
SPOR
Representative sequence (used for alignment): 5Ryc5 (420 AA)
Member sequence: A0A8S5V4Z4 (416 AA)
1 420 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520, PF05036, PF05257

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctjsp22
[NCBI] 		2825636 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
BK016198 [NCBI]
CDS location
range 31726 -> 32976
strand +
CDS
ATGAACAGCGGCAGTAAGGTCATCAAGATAGCCCGGGAGGAGCTGGGCTATCTGGAAAAAGCGTCCAACGCGCAGCTGGACAGCAAGACCGCCAACGCAGGGGATAAAAACTTCACGAAGTACGCACGGGACATTGACGCCATCCCCCATTTTTACAACGGGAAAAAGCAGGGATACCCGTGGTGCACGGTTTCCCTGGCCTGGTGGTTTATCAAGGCGTTCGACGTTGCTGAAGCAAAGCGGCTGCTGCTCCTCCCGGAGGACTCCCTCGGCGCCGGTGTGTACTACCTGAAGCGGTACTTCAAGGCGGCGGGACAGCTGGGCAGCACCCCGAAGGTGGGCGCTGTGGTATTCTTCGGCGACGATCACACGGGTATCGTGACGGAGATCGTGGGCAAGGGCTTCCGCACCATCGAGGGCAACACCAGCCCGCAGAGCGGCGTGGTAATCAACGGCGGCGGCGTGTACGAGAAGGAGTACGCCAGCGTGAAGTCCTCGTACACCTTCGGCTACCCGGATTATCAGGAGAACGACGAGGACGCGCCTGCGGAGAAGCCGAAGATCTATCTGTCCCCGGCGTACCACAAGGCCAACCAGTGCTGCTATAAGCGCCCCGATGGCCAGCAATGTTTTGAAACTCTCGAGAACAACGAGTTTCTGGACATTTTGCAGCCCATGCTGGAGCGCTGCGGCTTTGACATCATGCGCGGCCCACGCCGGACGCCCATGAGCGACGAATACGGCCCGGACTATATGTACCGCGCCATCAAGGAGAGCAACGAGTGGGGCGCAAAGGTGCACTATGTGTCCCACACCAACGGCAGCACCAACGGCCCTACCGGGAATGGAACGGTAAAGGGATTTTTGTCCATGCACCATCCCAGCAGCGCCAACGGAAAGAAACTGGCGGAGCTGATGGTGAAGTACCGCAAGGCGATCTACCCCCACGGCTGCCGGACGGCGACGCGGAGCGACCTGCACGAGCTGGACGACACGAACGCCTACGCCGTGTACCAGGAGCACGTGTACCACGACAATCCGGAGGACGCGGCGTGGTTCCACGAGCACATGGAGGAGTGCGCCGTGGCGGACTGCAAGGCGCTGTGCGAGTTCTGCGGGCTGGAATATGTGGAGCCGGAGAAGCCGCAGGAGCCGGAGACACCGGAACAGCCGACCGTGACCGAAACGTACACCGTGAAGGTGACGCGGAGCGCGGACGGCAAGAGCGGCACGTGGGAGATCGTGAAGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5Ryc5) rather than this protein.
PDB ID
5Ryc5
Method AlphaFoldv2
Resolution 94.20
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50