Protein

Protein accession
A0A8S5UDV2 [UniProt]
Representative
1GIkp
Source
UniProt (cluster: phalp2_10364)
Protein name
Cell wall hydrolase autolysin
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MTKVFLGVGHGGNDSGAIANGQREKDMTLKIANACREYLEDNGISVRMSRYQDENDSVTEEVKECNAYDPALAVDIHINAGGGDGFEIYHTVNGGTGKTLAQNIEAQVKALGQNSRGVKIRKNSNGKDYYAFIRTTKCPAVIAELGFIDNLTDLQAFDEDRELKAFGGAYARGILKTLGWTTGTEPAPSEGAKPNSGYNGNSIVDYLKSIGKDSSFNARKQYAQQYGIANYSGTAEQNTALLNAMRGSVTPAPAPANNYYPAFNSGSIVDGLKSIGVDSSYTHRKQIANANGITNYSGTASQNEQLCALARQGKLIKA
Physico‐chemical
properties
protein length:318 AA
molecular weight:34006,3 Da
isoelectric point:6,90
hydropathy:-0,51
Representative Protein Details
Accession
1GIkp
Protein name
1GIkp
Sequence length
459 AA
Molecular weight
51273,47930 Da
Isoelectric point
5,16078
Sequence
MLLEIPKEKIKRIDIINTEGMTGEEVYKKYMPDYLINLALYDMATGKNITHLKDEGISSGYLFSDEGIGIKNDNEIIWTTKSDKNVRDFVAGSPILVKNGEKNIEWGNKKSDYVSGIHNRSAIGFNADKVILFSSDKKMDLEELSQGLISAKCQFAINCDGGGSCHLQKGSKVYKKSTRKNASWLLIFLNYEIGYIDYSGTPEVKKMKKVFLGVGHGGKDCGAVANDLRESDINLSVATACADELLRHGIEVKLSRYTDEDDPLTEEIKECNEFDPDIAIDIHTNAGGGDGFEVYHHSGGHNSKRLAEFIESEARQLNNSRGLKTRLSDKTGKDYYGFIRDTNPPAVIVECAFIDNASDISVVDEAEEQKAFGIAYAKGILKYFEIEYIPEDEVTDKNVADLVLAIDSKEYMVDGVKKISDIAPKIENGRTLVPIYLLRELGLTVEWREKTKEVLIWKS
Other Proteins in cluster: phalp2_10364
Total (incl. this protein): 11 Avg length: 434,4 Avg pI: 6,66
Protein ID Length (AA) pI
1GIkp 459 5,16078
13H5b 471 5,63874
2ohmD 411 5,36250
3ZETZ 448 6,38111
3ZOai 437 8,54137
3iBMS 443 8,32005
3w1dg 448 5,06955
4knYl 438 7,97849
76lqI 443 5,19477
7Oa57 462 8,66553
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2076
2XPoB
 214 26,0% 446 1.843E-70
2 phalp2_30746
7yYs5
 21 28,9% 397 3.745E-56
3 phalp2_12440
ocDt
 3 26,4% 439 4.755E-50
4 phalp2_27081
2t2H8
 4 26,5% 331 9.978E-49
5 phalp2_35751
4e0HH
 1 27,8% 338 5.867E-46
6 phalp2_8273
84Gn
 1 26,0% 411 3.006E-44
7 phalp2_12438
niO9
 5 25,5% 411 2.789E-42
8 phalp2_11570
16YDd
 1 24,4% 462 1.701E-41
9 phalp2_24679
5Px9F
 8 24,3% 411 1.388E-37
10 phalp2_2440
5hQOj
 9 22,2% 342 7.112E-31

Domains

Domains [InterPro]
NAGPA
Ami3
Cu_amine_oxidN1
Representative sequence (used for alignment): 1GIkp (459 AA)
Member sequence: A0A8S5UDV2 (318 AA)
1 459 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01520, PF07833, PF09992

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ct1AP5
[NCBI] 		2825017 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
BK016070 [NCBI]
CDS location
range 18861 -> 19817
strand -
CDS
ATGACAAAAGTATTTTTAGGAGTAGGACATGGCGGGAATGATAGCGGAGCAATCGCTAATGGACAGAGAGAAAAAGATATGACTTTAAAAATTGCTAATGCTTGTCGTGAGTACTTAGAAGATAACGGAATAAGTGTTAGGATGTCGCGTTATCAAGATGAAAATGACAGCGTAACAGAGGAGGTAAAAGAATGTAACGCTTATGATCCAGCTTTAGCTGTTGATATTCATATCAATGCTGGTGGTGGAGATGGTTTTGAAATCTATCATACTGTTAATGGTGGAACAGGGAAAACACTAGCACAAAATATCGAAGCGCAAGTAAAAGCGCTTGGGCAAAATTCAAGAGGAGTTAAAATTAGGAAAAATTCTAATGGTAAAGATTATTATGCGTTTATTAGAACTACGAAATGCCCAGCAGTTATTGCAGAATTAGGATTTATTGACAATTTAACAGATCTACAAGCATTTGATGAAGATCGCGAATTAAAAGCATTTGGTGGAGCGTATGCAAGAGGAATTTTAAAAACATTAGGGTGGACAACAGGAACAGAACCAGCACCAAGCGAAGGAGCAAAACCTAATAGTGGGTACAACGGTAACAGCATTGTAGATTATTTAAAATCTATCGGTAAAGATAGCTCATTTAATGCTAGAAAACAGTACGCGCAACAATATGGGATTGCTAATTATTCTGGTACTGCGGAACAAAACACAGCTTTATTAAACGCTATGCGCGGATCAGTTACACCAGCACCGGCTCCAGCTAATAATTATTATCCAGCGTTTAATAGCGGTTCTATTGTAGACGGGCTTAAATCTATCGGGGTAGATAGTAGCTATACACATAGAAAACAGATTGCTAACGCTAATGGAATTACTAATTATTCTGGTACTGCTTCACAAAATGAGCAGTTATGCGCTTTAGCTAGACAAGGCAAATTAATTAAAGCGTAG

Gene Ontology

Description Category Evidence (source)
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity molecular function None (UniProt)
GO:0009253 peptidoglycan catabolic process biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1GIkp) rather than this protein.
PDB ID
1GIkp
Method AlphaFoldv2
Resolution 85.71
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50