Protein

Protein accession
A0A8S5NDP3 [UniProt]
Representative
6nDNB
Source
UniProt (cluster: phalp2_25942)
Protein name
Morphogenesis protein 1 wall, phi29, hydrolase, infection
Lysin probability
95%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAWITGNRYLTLSEMQNNADLMHYFFKSNGWTDNAISAMFGNMQTESTLNPGIWENLEPFVGGYGLVQWSPYTNYSKWAGTGWQDNGQKEMERIQYELENHLQWISTNTYPMTFREFSQSTLSPSYLAQAFLFNYERPTVKPQPARSKQAEYWYKYITGEEPPTPPTPPTPSNIPIWLLFKIKERRW
Physico‐chemical
properties
protein length:187 AA
molecular weight:21991,4 Da
isoelectric point:5,73
hydropathy:-0,72
Representative Protein Details
Accession
6nDNB
Protein name
6nDNB
Sequence length
543 AA
Molecular weight
61274,11700 Da
Isoelectric point
4,46109
Sequence
MLSGLDVSVFQGQMDFSSYDFVIIKASEGWAYQDEGMNRHVQSALSTNTPFGFYHYARPDLGNSPQTEADSFLSYVQPYIGQAVFALDWEQKSLNYPASWALEWCSYVKQKTGTTPFIYIQASVENNGSMRSLYQGGFPLWIAQWEVSQPQVETWDKWTLWQYQGSPLDLDYFDGTIDDWNTWAGGGSVQPLEWVTGNRYLSSSEMQNNAKIVYQYFNKQGWTLNAVAGMLGNMQRESTINPGIWESLQPYIPGGGYGLVGWTPYTRITEWLTSHGYAIDDGNGQLAKIQEEWLDPSVEVVWIETSTYPISFNEFVTSTESPEFLASVFLYNYERAGVAAESERRENARYWYDYLLANGGGSVFVPRLNSDGMEGNPYWYDYNPFYLAGYGLPNCTAYCWGRWYEIQGVYPELPLGNANTWWNDAQNMGKKTGQTPQLGAIIVTWYSDGGHVAVVEQINSDGSIVTSNSGWGSSYFWTETLYPENGYLASWVPSEAYVQGFIYLDISPVGPGPVPDRPTFGKASKGKASKYGNLWLTLRGVKQ
Other Proteins in cluster: phalp2_25942
Total (incl. this protein): 33 Avg length: 529,5 Avg pI: 4,36
Protein ID Length (AA) pI
6nDNB 543 4,46109
2uSH 544 4,22106
5O2CA 531 4,27994
5OFob 531 4,25107
5Ogf7 550 4,64564
5Q1Sy 549 4,59028
5QeGP 551 4,47234
5QgKw 564 4,57568
5ROIm 531 4,19463
5RSIv 531 4,25289
5TLvT 533 4,29836
5Vucy 531 4,22157
63Xzg 533 4,20099
63zgV 533 4,25760
63zhT 533 4,21787
69Qhe 531 4,23515
69SpD 534 4,21139
6gck2 558 4,48865
6hGaX 533 4,27994
6hJlU 531 4,19946
6lZNT 533 4,21139
6pcR8 531 4,21685
6tswB 531 4,18906
7NO12 547 4,23947
7OloJ 545 4,24999
8fJom 545 4,21088
8resR 547 4,25050
8tp2I 545 4,29375
8v6vq 547 4,21088
b4CR 561 4,50099
nAhb 535 4,72550
xsjw 545 4,22828
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_40149
8qW5P
 4 62,5% 355 1.390E-198
2 phalp2_29675
8uHT1
 45 42,7% 402 1.753E-98
3 phalp2_4910
6agyC
 8 43,0% 365 2.165E-88

Domains

Domains [InterPro]
GH25
Phage_lys2
CHAP
Disordered region
Representative sequence (used for alignment): 6nDNB (543 AA)
Member sequence: A0A8S5NDP3 (187 AA)
1 543 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF05257, PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ctFkM10
[NCBI] 		2826548 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
BK015145 [NCBI]
CDS location
range 9873 -> 10436
strand +
CDS
ATGGCGTGGATTACAGGAAACAGATACCTTACACTGTCTGAAATGCAAAATAATGCTGACCTTATGCACTATTTCTTCAAGTCTAATGGATGGACTGATAATGCAATTTCAGCCATGTTTGGCAATATGCAGACAGAGAGCACTCTTAATCCCGGAATTTGGGAAAATCTTGAGCCATTCGTAGGCGGCTATGGTCTTGTTCAGTGGTCGCCATACACCAATTATTCAAAGTGGGCTGGTACTGGTTGGCAAGATAATGGGCAGAAGGAAATGGAGCGTATCCAATACGAGTTGGAGAACCACTTGCAATGGATTAGCACAAACACCTATCCTATGACATTCAGAGAGTTTTCTCAGTCAACTCTTTCACCGTCATATCTTGCACAAGCGTTTCTTTTCAACTACGAAAGACCTACTGTAAAACCGCAACCTGCAAGAAGCAAACAAGCTGAATATTGGTATAAGTATATTACTGGTGAAGAACCGCCTACACCGCCTACGCCGCCAACTCCAAGCAATATTCCGATTTGGCTGTTGTTCAAAATAAAAGAAAGGAGATGGTAA

Gene Ontology

Description Category Evidence (source)
GO:0016787 hydrolase activity molecular function None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6nDNB) rather than this protein.
PDB ID
6nDNB
Method AlphaFoldv2
Resolution 84.58
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50