Protein

Protein accession
A0A873WDP0 [UniProt]
Representative
4E5Kp
Source
UniProt (cluster: phalp2_4666)
Protein name
LysM domain-containing protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNPSGTPSRLMSLAAALSLIAAGGTAVTGEEPETPMVRPETPEQPTPEATTPPAPPSPERGAQKRAKVAERYKVRAGDSLSSIAEAELGSADKWPNLYGANLKAVGSDPDSLHVGTVLEIREGTAPRLRAPGSVGNGRHAKPKAPAEVRTYANNLDGWIHESLAVMRDHGIPGTYSGIYRNVMRESGGNPRAVNNWDSNAAAGTPSKGLLQTIEPTFRAYHVPGTSWDVFDPVANIAAACNYAASRYGSIDNVSGAY
Physico‐chemical
properties
protein length:257 AA
molecular weight:27010,8 Da
isoelectric point:6,53
hydropathy:-0,47
Representative Protein Details
Accession
4E5Kp
Protein name
4E5Kp
Sequence length
219 AA
Molecular weight
23487,96160 Da
Isoelectric point
8,61022
Sequence
VRKTVAAATVGIMAVAAVPTTFEKPERPDPTPAAQTLDLGLTSPASVEALEDQAGAVREQERQAREHEAAMKASKEAHRKAVEARKEAERSRSAKRTPKAPQKTVQPPSQPSYDNNLDGWIREALSIMAKHGIPGSYNGLYRNIMRESGGNPHAINLTDSNAAKGTPSKGLLQAIDPTFRAYHVGGTSWDIYDPVANIVACANYAAHTYGSIDNVNGAY
Other Proteins in cluster: phalp2_4666
Total (incl. this protein): 7 Avg length: 235,6 Avg pI: 7,88
Protein ID Length (AA) pI
4E5Kp 219 8,61022
4E54M 219 8,91071
4ErQT 219 8,57805
7o7eh 219 7,86045
A0A873WE29 258 9,11514
A0A873WQ50 258 5,54228
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_32197
6W6YD
 2 30,3% 201 2.488E-20
2 phalp2_5267
80D09
 2 31,0% 145 8.632E-18

Domains

Domains [InterPro]
Disordered region
SLT
Representative sequence (used for alignment): 4E5Kp (219 AA)
Member sequence: A0A873WDP0 (257 AA)
1 219 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Sycamore
[NCBI] 		2767589 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
MT701593 [NCBI]
CDS location
range 30331 -> 31104
strand +
CDS
GTGAACCCGAGCGGTACGCCCTCGCGCCTTATGAGCCTTGCCGCCGCCCTCTCGCTCATCGCTGCGGGAGGTACGGCGGTCACCGGAGAGGAGCCCGAGACGCCCATGGTTCGCCCTGAGACGCCCGAACAGCCCACCCCCGAGGCAACCACCCCGCCCGCTCCCCCGTCGCCCGAGAGAGGCGCACAGAAGCGCGCCAAGGTAGCCGAGCGCTACAAGGTCCGGGCCGGTGACTCGCTGTCCAGCATCGCCGAGGCCGAGCTAGGCAGCGCGGACAAGTGGCCGAACCTCTACGGCGCGAACCTCAAGGCCGTTGGCTCGGACCCTGACTCGCTGCATGTCGGCACGGTCCTTGAGATCCGGGAAGGCACCGCCCCAAGGCTGCGAGCACCGGGCAGCGTCGGCAACGGTAGGCACGCCAAGCCCAAGGCACCGGCCGAGGTGAGGACGTACGCGAACAACCTTGACGGCTGGATACATGAATCACTGGCGGTCATGCGGGACCATGGGATTCCGGGAACGTACAGCGGGATTTACCGCAACGTCATGCGGGAATCCGGGGGCAACCCTCGCGCGGTGAACAACTGGGATTCGAACGCTGCCGCTGGCACCCCGAGTAAGGGGCTGTTGCAGACCATAGAGCCCACGTTCCGCGCGTATCACGTGCCCGGTACTTCCTGGGATGTATTCGACCCCGTCGCCAACATCGCCGCCGCCTGCAACTACGCCGCTAGTCGGTACGGCTCGATAGATAACGTGTCCGGCGCTTACTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4E5Kp) rather than this protein.
PDB ID
4E5Kp
Method AlphaFoldv2
Resolution 74.41
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50