Protein

Protein accession
A0A6J5SGW5 [UniProt]
Representative
4Kmdl
Source
UniProt (cluster: phalp2_31671)
Protein name
D-alanyl-D-alanine carboxypeptidase
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MPSFSRTSKARLATCHPDIQRLWNEVIKEKDCIVICGARTLEDQKKAFAGGFSKLDGVTKKSAHQISKEKPLSTAIDSLPYPLDWNDVKGHTEFARFVLAKASALGIQLEWGGDWKTFKDRPHFQLKK
Physico‐chemical
properties
protein length:128 AA
molecular weight:14457,5 Da
isoelectric point:9,45
hydropathy:-0,51
Representative Protein Details
Accession
4Kmdl
Protein name
4Kmdl
Sequence length
184 AA
Molecular weight
21573,19170 Da
Isoelectric point
6,44556
Sequence
MKEMFIEVIDFDVVDPTTYSFHYANDEWHKFHNIYITSDGKRWNWLDGMWFEVKDGEEPQKGYKFSNRSKSNLATCHPKLQKIFNEVIKHTDCIILEGHRTIERQKELVAKGVSKTMNSKHLSSPSRAVDVAPFPLDWDDIKGFKNLGKIVIYTADKLGIKIEWGGDWNSFKDYPHYQLANEEK
Other Proteins in cluster: phalp2_31671
Total (incl. this protein): 2 Avg length: 156,0 Avg pI: 7,95
Protein ID Length (AA) pI
4Kmdl 184 6,44556
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_23690
sMBl
 3369 52,3% 126 6.712E-42
2 phalp2_14244
39Gpo
 1 42,4% 139 1.421E-33
3 phalp2_39303
4ipTG
 1 43,8% 130 1.395E-27
4 phalp2_28914
5wnp3
 97 42,0% 126 4.881E-27
5 phalp2_9374
8yjUJ
 31 35,1% 165 8.162E-26
6 phalp2_22785
8jxEz
 234 43,7% 135 2.545E-24
7 phalp2_13949
8Fkan
 8452 45,0% 122 6.498E-24
8 phalp2_26018
6REqE
 256 42,6% 122 3.098E-23
9 phalp2_15082
1DVW
 42 43,5% 117 1.311E-21
10 phalp2_14517
7CiFr
 1 38,9% 136 2.446E-21

Domains

Domains [InterPro]
PET_M15
Representative sequence (used for alignment): 4Kmdl (184 AA)
Member sequence: A0A6J5SGW5 (128 AA)
1 184 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF13539

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
LR797397 [NCBI]
CDS location
range 6888 -> 7274
strand +
CDS
ATGCCCAGTTTTAGCAGAACCTCAAAAGCAAGATTAGCCACTTGCCATCCAGACATACAAAGACTTTGGAACGAAGTTATTAAAGAAAAAGATTGCATTGTCATTTGTGGTGCAAGAACTTTAGAAGACCAGAAGAAAGCTTTTGCCGGTGGTTTTTCAAAACTTGATGGGGTGACTAAAAAATCAGCACATCAAATTAGCAAAGAAAAACCCTTGTCAACTGCGATTGATTCTTTACCTTACCCGCTAGATTGGAATGACGTTAAAGGGCATACGGAATTTGCTAGGTTTGTTTTAGCAAAAGCCTCTGCACTAGGCATCCAATTAGAATGGGGCGGTGACTGGAAAACTTTTAAAGACCGTCCGCATTTTCAATTAAAAAAATAA

Gene Ontology

Description Category Evidence (source)
GO:0004180 carboxypeptidase activity molecular function None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4Kmdl) rather than this protein.
PDB ID
4Kmdl
Method AlphaFoldv2
Resolution 80.55
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50