Protein

Protein accession
A0A6J5RM96 [UniProt]
Representative
5Etjg
Source
UniProt (cluster: phalp2_14639)
Protein name
Type IV secretion system lytic transglycosylase VirB1
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MGAVILTAATLVGLVGACAPAVANSTMLAVVQVESRGDPLAIYVNKSTVQPRPAATVESAAATVRRYVATGHTVDMGLAGINTRTAARLGLSIEQSFDPCANVAAGAAVLAEGYDRGVAEHGEGQRALRAALSAYNTGSLTHGMENGYVDRYGPWKEEGETKPPAQPAPAADLTTAADLYAADVRAALAER
Physico‐chemical
properties
protein length:191 AA
molecular weight:19549,8 Da
isoelectric point:5,36
hydropathy:0,04
Representative Protein Details
Accession
5Etjg
Protein name
5Etjg
Sequence length
159 AA
Molecular weight
16394,38380 Da
Isoelectric point
8,76527
Sequence
MAVLTPAVYMQIALACGNGADPRLIDAIAAVESGRDTAAVNRNANGTIDAGPMQINSSHFGEFGLNAQAVRDPCTAIRTGVAILAQAAGGMDALQPEAVDRLADRLAAGVSAYNTGSPTAGISNGYLRKVMDAFRGRPSTPPRPTRTLASQFPKIGEGR
Other Proteins in cluster: phalp2_14639
Total (incl. this protein): 3 Avg length: 175,7 Avg pI: 7,89
Protein ID Length (AA) pI
5Etjg 159 8,76527
4T006 177 9,56061
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_16042
3OOEU
 2 25,3% 146 2.901E-09
2 phalp2_19554
3Q83V
 1 33,5% 128 5.374E-09
3 phalp2_4246
7W7hs
 77 24,5% 118 8.562E-08
4 phalp2_37803
4Ec3R
 3 23,4% 179 1.582E-07
5 phalp2_6299
6TEAE
 47 25,9% 104 2.483E-06
6 phalp2_15717
3gGh2
 52 27,7% 119 4.569E-06
7 phalp2_14226
35zuJ
 21 32,4% 117 1.139E-05
8 phalp2_29014
6Dcie
 9 25,6% 125 2.093E-05
9 phalp2_27585
5Ftcj
 5 26,5% 113 2.093E-05
10 phalp2_29294
tD4R
 30 25,9% 104 3.194E-04

Domains

Domains [InterPro]
SLT
Representative sequence (used for alignment): 5Etjg (159 AA)
Member sequence: A0A6J5RM96 (191 AA)
1 159 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
LR797181 [NCBI]
CDS location
range 95256 -> 95831
strand -
CDS
GTGGGGGCGGTGATCCTCACCGCGGCCACTCTGGTAGGCCTGGTGGGCGCCTGCGCGCCCGCCGTGGCGAACTCCACGATGCTGGCGGTGGTCCAGGTCGAGTCCCGCGGCGACCCGCTAGCGATCTACGTCAACAAGTCGACCGTGCAGCCGCGCCCCGCGGCGACGGTCGAGAGTGCGGCGGCGACCGTTCGACGATACGTGGCCACGGGCCACACCGTCGATATGGGGCTGGCCGGGATCAACACTCGGACGGCCGCCCGGCTCGGGTTATCGATCGAACAATCCTTCGACCCGTGCGCCAATGTCGCGGCAGGGGCCGCGGTATTGGCAGAGGGGTATGATAGAGGCGTTGCGGAGCACGGAGAGGGGCAGCGAGCGTTACGCGCTGCTCTGAGTGCCTACAACACGGGATCACTTACCCACGGGATGGAAAATGGCTATGTCGATCGGTATGGGCCGTGGAAGGAGGAAGGGGAAACCAAGCCCCCTGCCCAACCCGCGCCGGCGGCCGACCTTACTACGGCCGCCGACCTCTACGCGGCCGACGTGCGGGCCGCCCTGGCCGAGCGCTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5Etjg) rather than this protein.
PDB ID
5Etjg
Method AlphaFoldv2
Resolution 92.71
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50