Protein

Protein accession
A0A6J5NIW6 [UniProt]
Representative
1cVbp
Source
UniProt (cluster: phalp2_10282)
Protein name
VanY D-alanyl-D-alanine carboxypeptidase
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MPPKYPYKKMVLPKELASMKDETGKLTVEQLKVAPNDAKFWKWAGIAFSQMFNDAEKAGIKLQNIGDYRSYEQQLAMFNERYSTKDGGRKPQVTRTWDGKTYYLKPGMSPSSSPGRSNHGLGLAIDINVTKAEVLNWLCENAPKYGFYLQSDDPKSPEFENWHWQYVCGDATPEAVKTRYETNQAKKAAKGK
Physico‐chemical
properties
protein length:192 AA
molecular weight:21844,5 Da
isoelectric point:9,21
hydropathy:-0,86
Representative Protein Details
Accession
1cVbp
Protein name
1cVbp
Sequence length
62 AA
Molecular weight
6890,65540 Da
Isoelectric point
4,68782
Sequence
SNHGWGLAIDLNVTDKKVAEWLCANAPAYGFYLQGDDPKSGEFELWHWQYVLGDVVPKVLGA
Other Proteins in cluster: phalp2_10282
Total (incl. this protein): 3 Avg length: 107,0 Avg pI: 6,34
Protein ID Length (AA) pI
1cVbp 62 4,68782
27jMt 67 5,11530
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3617
4O60Z
 64 39,3% 66 7.711E-11
2 phalp2_11507
GBUA
 1 37,6% 69 1.538E-06
3 phalp2_8111
6GeTS
 1 31,8% 69 1.875E-04
4 phalp2_20841
6yKUt
 1 33,3% 54 9.322E-04

Domains

Domains [InterPro]
Unannotated
Representative sequence (used for alignment): 1cVbp (62 AA)
Member sequence: A0A6J5NIW6 (192 AA)
1 62 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
LR796639 [NCBI]
CDS location
range 157520 -> 158098
strand +
CDS
ATGCCTCCTAAGTACCCTTACAAAAAAATGGTTCTTCCTAAAGAACTTGCTTCAATGAAGGACGAAACTGGCAAACTTACAGTTGAACAACTAAAGGTTGCCCCAAACGATGCAAAGTTTTGGAAATGGGCTGGAATTGCTTTCAGCCAAATGTTTAATGATGCTGAAAAAGCTGGCATTAAACTGCAGAACATTGGCGATTATCGCTCATACGAACAGCAACTTGCCATGTTTAATGAAAGATACTCAACAAAAGACGGTGGTCGCAAACCTCAGGTTACTCGCACGTGGGATGGCAAAACTTACTACTTGAAGCCCGGCATGAGCCCATCGTCTAGCCCTGGTCGCTCAAATCATGGTCTCGGTCTAGCGATTGATATCAACGTAACAAAAGCTGAAGTACTTAACTGGCTTTGTGAGAATGCTCCTAAATACGGTTTCTACCTCCAGAGCGATGACCCAAAGTCTCCAGAGTTTGAGAACTGGCATTGGCAGTACGTTTGCGGCGATGCAACTCCAGAGGCTGTAAAAACCCGCTACGAGACTAACCAAGCAAAAAAAGCTGCCAAAGGAAAGTAA

Gene Ontology

Description Category Evidence (source)
GO:0004180 carboxypeptidase activity molecular function None (UniProt)
GO:0006508 proteolysis biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1cVbp) rather than this protein.
PDB ID
1cVbp
Method AlphaFoldv2
Resolution 86.85
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50