Protein

Protein accession
A0A6G5YNH0 [UniProt]
Representative
3xPF1
Source
UniProt (cluster: phalp2_24308)
Protein name
LysM domain protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNTKSKPKRVIASLALSLGLAAGIVSSNTKQVDASTIESESIYVVQSGDCLWTIAQKFNMTLRQLEALNGLNDYSIIYPDDRLKLVGDATVVSYSDNETASITYEDPATPDYSQQQQVQEQAPQAPANNYQSQASSQTVSGSEASAKAWIAQRESGGSYTVVNPSSGTYGRYQLTPDKLKGDYSPANQERVADNYVRQKYGSWSQAKAFWLANGWY
Physico‐chemical
properties
protein length:216 AA
molecular weight:23649,7 Da
isoelectric point:5,04
hydropathy:-0,57
Representative Protein Details
Accession
3xPF1
Protein name
3xPF1
Sequence length
150 AA
Molecular weight
16285,33810 Da
Isoelectric point
9,34825
Sequence
LNNKSSLIHVGDKIKLTGAYTYTAPVVQTKVNYNASTQTSNQAASQSNTQTSYKQPATTQQSTASTSTYSNVSTGTNSSAKAWIANKESGGSYTAVNASSGAYGKYQLLPQYLHGDYSPANQERVADQYVAQRYNGWSGAQQHWQAYGWY
Other Proteins in cluster: phalp2_24308
Total (incl. this protein): 6 Avg length: 182,2 Avg pI: 7,13
Protein ID Length (AA) pI
3xPF1 150 9,34825
28v7Q 200 5,05739
4SuEL 209 9,22415
7kzZS 156 9,65667
8aURJ 162 4,44250
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25312
8s6MF
 52 45,6% 149 4.500E-33
2 phalp2_13080
89ExL
 28 33,6% 116 2.143E-11
3 phalp2_16605
bu7w
 1 32,1% 112 7.797E-09
4 phalp2_7114
2l4Xo
 15 32,0% 156 1.711E-07
5 phalp2_10097
6ecp
 3 31,2% 131 2.004E-06
6 phalp2_25328
8iuMX
 22 25,1% 131 2.725E-06

Domains

Domains [InterPro]
Disordered region
Unannotated
Representative sequence (used for alignment): 3xPF1 (150 AA)
Member sequence: A0A6G5YNH0 (216 AA)
1 150 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteriophage sp
[NCBI] 		38018 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
MN856100 [NCBI]
CDS location
range 92783 -> 93433
strand +
CDS
ATGAATACAAAGAGTAAGCCCAAACGTGTTATTGCTAGTTTAGCTTTATCCTTAGGCTTGGCAGCTGGTATTGTTTCAAGCAATACTAAGCAAGTAGATGCATCAACAATTGAATCAGAAAGCATCTATGTAGTACAATCAGGCGATTGTTTATGGACTATCGCTCAAAAATTTAACATGACATTAAGACAATTAGAAGCATTGAATGGTCTAAACGATTATTCTATTATCTACCCAGATGATAGATTGAAGTTGGTTGGAGATGCTACTGTGGTTTCTTATTCAGATAATGAAACTGCAAGCATAACATACGAAGACCCAGCTACACCTGACTATTCACAACAGCAACAAGTGCAAGAGCAAGCACCTCAAGCACCTGCTAATAACTACCAATCGCAAGCAAGTTCTCAAACAGTTTCAGGTAGTGAAGCTAGTGCTAAGGCTTGGATAGCTCAACGTGAATCAGGTGGTTCATATACAGTTGTCAACCCTTCTTCGGGCACATATGGTCGTTATCAATTAACACCAGATAAGTTAAAGGGAGATTATTCCCCTGCTAATCAGGAACGTGTTGCTGATAATTATGTGCGACAGAAATATGGCTCTTGGAGCCAAGCTAAAGCTTTTTGGTTAGCTAATGGTTGGTACTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3xPF1) rather than this protein.
PDB ID
3xPF1
Method AlphaFoldv2
Resolution 58.86
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50