Protein

Protein accession
A0A0K0PVK3 [UniProt]
Representative
7dyH5
Source
UniProt (cluster: phalp2_23532)
Protein name
Cell wall peptidase
Lysin probability
100%
PhaLP type
VAL
Probability: 62% (predicted by ML model)
Protein sequence
MRGVWRELYDTEPEAPPPYKPDWYDLLKDDLLLRKASQYLLPLNTLAEALPGDVLVFRMRQNMAAKHCGILVDEGRMVHALTGKDVEEVTVNHVYWKRCVGAFRFPEV
Physico‐chemical
properties
protein length:108 AA
molecular weight:12514,4 Da
isoelectric point:5,88
hydropathy:-0,29
Representative Protein Details
Accession
7dyH5
Protein name
7dyH5
Sequence length
210 AA
Molecular weight
22832,55000 Da
Isoelectric point
6,44875
Sequence
MRCMMGGCCMSERGVSGGVDGSERVDPLIRPFGPPSPRGGEGEDGAARGGEGEDGAARGEEEGDRGNAFASRIVSVARSWIGTPYRHQASLKGVGCDCLGLVRGVWREIHGAEPELPPAYQPDWAERSGEDRLREAARRYFGVELAVAQMRPGDLLLFCWRPDLPAKHAGILSTGDRFIHAYEQAAVIESALVPSWRRRIAGVFRFPQKV
Other Proteins in cluster: phalp2_23532
Total (incl. this protein): 27 Avg length: 161,4 Avg pI: 7,36
Protein ID Length (AA) pI
7dyH5 210 6,44875
2cHtO 169 7,74496
3EpDs 149 6,52247
3fHcu 172 6,19718
4CbUj 170 7,01179
4uF8Z 170 7,00645
6LvMQ 148 9,25129
6PR0v 148 9,49698
6Rqo9 173 9,36160
7BReZ 154 5,84409
7bxY3 153 8,45163
7dy3x 251 8,34822
7hv4D 194 8,34513
7m8V2 179 8,26235
7ma2X 153 6,95712
7ma54 153 6,90227
7maJT 153 6,96337
7maul 153 6,64501
7pnPR 172 5,95590
7qz8z 151 6,59323
7sdB4 149 7,89120
A0A1V0DYB6 139 8,45163
A0AAE7VCK0 150 6,64689
A0AAE9C7G2 148 5,95061
A0AAU7VG01 139 8,43912
A0AAX3C7I8 150 7,01634
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_38134
6Rz4z
 22 69,7% 139 2.095E-70
2 phalp2_922
7oz39
 3811 68,3% 136 1.139E-67
3 phalp2_13596
5kk1p
 739 56,3% 142 1.228E-52
4 phalp2_23488
6R5Ve
 5 50,7% 136 2.583E-47
5 phalp2_9006
4W2ru
 1 39,3% 188 4.821E-41
6 phalp2_9317
7vIt4
 9 38,9% 136 1.531E-28
7 phalp2_38771
1fCGD
 1216 44,9% 138 8.803E-27
8 phalp2_19724
4MrB2
 69 34,0% 138 6.359E-22
9 phalp2_40391
3ZpBV
 2 36,2% 135 8.669E-22
10 phalp2_29511
1Z7BX
 61 40,0% 155 6.606E-20

Domains

Domains [InterPro]

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage RDJL Phi 2
[NCBI] 		1682380 Xiamenvirus > Xiamenvirus RDJL2
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
KT266805 [NCBI]
CDS location
range 57481 -> 57807
strand +
CDS
TTGAGAGGTGTCTGGCGTGAGCTATACGACACCGAGCCTGAAGCTCCCCCGCCTTACAAGCCTGATTGGTATGACCTTTTGAAGGACGACCTGCTTCTGCGCAAGGCTTCCCAGTATCTTTTGCCATTGAATACGCTGGCAGAGGCTCTCCCGGGAGATGTGCTGGTGTTCAGGATGCGCCAAAACATGGCAGCAAAGCACTGTGGCATCTTGGTAGACGAAGGTCGGATGGTCCATGCACTTACTGGCAAGGACGTTGAAGAGGTCACCGTCAACCACGTATATTGGAAGCGGTGTGTCGGAGCCTTCCGCTTTCCGGAGGTATAA

Gene Ontology

Description Category Evidence (source)
GO:0001897 symbiont-mediated cytolysis of host cell biological process None (UniProt)
GO:0008234 cysteine-type peptidase activity molecular function None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi000676ba15_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7dyH5) rather than this protein.
PDB ID
7dyH5
Method AlphaFoldv2
Resolution 77.64
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50