Protein

Protein accession
A0A8S5QNY8 [UniProt]
Representative
3KDUM
Source
UniProt (cluster: phalp2_36647)
Protein name
lysozyme
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAFSPAAMADMNVIDVSGWQSADITRVVDADAAIVKITEGSWYANPSWRSQIEWARQTGKACGGYHYADGGNVTAEVNHYLNQF
Physico‐chemical
properties
protein length:84 AA
molecular weight:9184,0 Da
isoelectric point:4,74
hydropathy:-0,24
Representative Protein Details
Accession
3KDUM
Protein name
3KDUM
Sequence length
90 AA
Molecular weight
9631,93470 Da
Isoelectric point
10,27589
Sequence
VGILNKGNPKHKRLRRHIGRPLTALAAVLCVAVAPVASANMNVIDVSGWQSADVTRVVDADAAIVKITEGSGYVNPSWRSQTDWARQTGK
Other Proteins in cluster: phalp2_36647
Total (incl. this protein): 12 Avg length: 93,4 Avg pI: 8,26
Protein ID Length (AA) pI
3KDUM 90 10,27589
3pRAP 79 8,56896
3tL5k 88 8,90652
3uF0M 106 8,89259
5UBW8 121 7,81758
5V6i8 65 8,01015
6ezds 105 9,44528
6hBQv 107 8,54221
6n2UZ 53 8,03310
6nVZX 150 7,04908
6pG1L 73 8,78783
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_9123
5Tx0T
 16 42,3% 85 9.972E-18
2 phalp2_10228
UWZ7
 5 40,3% 57 4.869E-17

Domains

Domains [InterPro]
Unannotated
Representative sequence (used for alignment): 3KDUM (90 AA)
Member sequence: A0A8S5QNY8 (84 AA)
1 90 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctB9E3
[NCBI] 		2826187 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
BK015701 [NCBI]
CDS location
range 1 -> 253
strand -
CDS
ATGGCGTTCAGCCCGGCCGCGATGGCCGACATGAACGTCATCGACGTGTCCGGTTGGCAGTCGGCCGACATCACGCGCGTGGTGGACGCGGACGCCGCCATCGTGAAGATCACCGAGGGTTCGTGGTACGCGAACCCGTCCTGGCGCAGCCAGATCGAATGGGCGCGGCAGACCGGCAAGGCCTGCGGCGGCTACCATTACGCCGACGGCGGCAACGTGACCGCGGAGGTCAATCATTATCTGAACCAGTTCA

Gene Ontology

Description Category Evidence (source)
GO:0003796 lysozyme activity molecular function None (UniProt)
GO:0009253 peptidoglycan catabolic process biological process None (UniProt)
GO:0016998 cell wall macromolecule catabolic process biological process None (UniProt)

Enzymatic activity

EC Number Entry Name Reaction Catalyzed Classification Evidence Source
3.2.1.17 None Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. match to sequence model evidence used in automatic assertion
ECO:ECO:0000256 		ARBA:ARBA00000632

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3KDUM) rather than this protein.
PDB ID
3KDUM
Method AlphaFoldv2
Resolution 83.78
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50