Protein

Protein accession
A0A6G5YIW3 [UniProt]
Representative
71l0d
Source
UniProt (cluster: phalp2_15013)
Protein name
Lysozyme
Lysin probability
100%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MINKQRILIGALTASLTFIGGIKGYEGFTSKPVIPTKGDVPTIGYGTTVYPNGKKVTLKDKPITRETAHYYLANHVNAIDAELKKSLGNVKLTQNEFESYLDFAYQYGVPTFNKSSMHRLLKTDQYTKACNAMLRYHYVAGRDCSVRKNNCYGVWTRQQARVKKCLSS
Physico‐chemical
properties
protein length:168 AA
molecular weight:18913,6 Da
isoelectric point:9,70
hydropathy:-0,43
Representative Protein Details
Accession
71l0d
Protein name
71l0d
Sequence length
107 AA
Molecular weight
11834,33300 Da
Isoelectric point
9,48686
Sequence
MSNKTKYIAAVLAASAAFFVGVKNDEGFTSKPVIPVKGDRPTQGHGSTFKPNGSPVKMTDPPITRATADKWLRNDVAKREVAFKDSLKGVKLSQTEYDLYLDFTYQY
Other Proteins in cluster: phalp2_15013
Total (incl. this protein): 13 Avg length: 109,9 Avg pI: 8,61
Protein ID Length (AA) pI
71l0d 107 9,48686
1j42f 122 5,16510
35DRq 113 6,08975
4jYxy 98 9,89275
51izu 83 9,51039
5OL6 82 9,81281
6IvLA 96 6,04269
6R4oP 90 9,51039
71lHR 107 9,48686
77dD4 99 9,60007
7c9R 96 7,92370
A0A6G5Y3V9 168 9,65358
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_15849
4kKIv
 1444 51,8% 108 6.712E-41
2 phalp2_24578
4ZJqY
 9 41,9% 93 5.134E-20
3 phalp2_16295
53jIP
 19 39,2% 102 5.134E-20
4 phalp2_9019
535M3
 35 37,3% 91 1.018E-16
5 phalp2_4451
31DIk
 4919 40,2% 92 1.018E-16
6 phalp2_1991
4GrLi
 1 36,5% 82 4.528E-15
7 phalp2_6383
2kCF
 1 30,0% 103 3.596E-09
8 phalp2_4289
84eDR
 22 32,1% 84 2.969E-07
9 phalp2_20179
86gSO
 1 26,7% 86 1.962E-06
10 phalp2_15021
74f9k
 98 28,9% 76 4.081E-04

Domains

Domains [InterPro]
GH24
Representative sequence (used for alignment): 71l0d (107 AA)
Member sequence: A0A6G5YIW3 (168 AA)
1 107 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudoviricetes sp
[NCBI] 		2832643 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
MN856013 [NCBI]
CDS location
range 14032 -> 14538
strand -
CDS
ATGATAAATAAACAAAGAATACTTATTGGCGCATTAACTGCATCATTGACGTTCATTGGTGGAATAAAAGGCTATGAGGGTTTTACATCAAAGCCAGTGATACCAACAAAGGGGGATGTTCCAACTATTGGATATGGAACTACGGTCTATCCTAACGGCAAAAAAGTAACGCTCAAAGATAAACCTATCACAAGAGAAACAGCTCATTACTATTTAGCTAATCATGTCAATGCAATTGATGCAGAGCTAAAGAAATCACTAGGGAATGTCAAACTTACACAAAATGAATTTGAATCATATCTTGACTTTGCTTATCAGTATGGTGTTCCTACTTTCAACAAGTCATCAATGCACAGGTTATTAAAGACAGATCAGTACACAAAGGCATGTAACGCAATGCTAAGATATCACTATGTCGCAGGGCGTGATTGTTCAGTCCGTAAAAATAACTGCTACGGTGTATGGACTAGACAACAAGCGAGAGTTAAAAAATGCTTATCTTCTTAA

Gene Ontology

Description Category Evidence (source)
GO:0003796 lysozyme activity molecular function None (UniProt)
GO:0009253 peptidoglycan catabolic process biological process None (UniProt)
GO:0016998 cell wall macromolecule catabolic process biological process None (UniProt)
GO:0031640 killing of cells of another organism biological process None (UniProt)
GO:0042742 defense response to bacterium biological process None (UniProt)

Enzymatic activity

EC Number Entry Name Reaction Catalyzed Classification Evidence Source
3.2.1.17 None Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. match to sequence model evidence used in automatic assertion
ECO:ECO:0000256 		RuleBase:RU003788

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (71l0d) rather than this protein.
PDB ID
71l0d
Method AlphaFoldv2
Resolution 95.68
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50