Protein

Protein accession
H8ZMZ3 [UniProt]
Representative
1VyAB
Source
UniProt (cluster: phalp2_38885)
Protein name
Peptidase M23 domain-containing protein
Lysin probability
99%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MAKAAVLKGSKINVYKLVTVKEPDARQKKKDPTGYETARGLNATTKAVNNLGTTLNGINKIVGDLKQIELDRLETANKNKPKMDPKYGKSKKGGGILGSLAKGFLKTGGGFLSGLLGLLGNLFKAFVVLPVLTWLSKEENQEKVAGALEVLAKFGKFIWNWASFGVTNTIDGLYKLLSDDSSWMDRLVGFGQALLGVGSIFIGLKGLKWLLNPVKVAKGITAAVKALVKFVTKRGNPLRIPGRRKGGKAAGGLVTAAAIALPQMAQGGWITGPQSGYPVSLDGGKSTSFIGHGTEYVSQKSSGGAFVTPYDTPATRKNPGVTAMRQAEAARMGYSQGGEVKESLNLTADQFRALAYGVSGEAQRNTADEYGTAAAILNRVADPRYPNNIMGVLSQNNPVQFAAYYDGSMRHEEKLQEKLSSQVGQTAIIAALRELKGRDSFKGTAMYKHMGSDDVKFSRRGNFYHYSEQRGKNDPPPSSIPTHYLKFIQNQQADPDQQPNAPGNDSGIMGGLSNALQGLTGFLSNVFLGGPAQAAPMPQVAPPPARKAESAANDGARGVSVATGDMGEKVFPLPKGRFEATARQIFGAPRDGGSRSHLGVDLTEASPWGPDPKIPVVAAIAGSVLSEEYKAGQTYHSGAMIRGKDGYDQRYLHMEPSVKPGQEVNAGDQIGRLYDDGINSHLHFEVY
Physico‐chemical
properties
protein length:687 AA
molecular weight:73275,5 Da
isoelectric point:9,63
hydropathy:-0,37
Representative Protein Details
Accession
1VyAB
Protein name
1VyAB
Sequence length
642 AA
Molecular weight
68775,15020 Da
Isoelectric point
9,64500
Sequence
MAKAAVQKSSKINFYKFVNVKEPPSDLEKKNPGEYATTVSINKSTEAINNLGATINGMAGIVADLKKIELERLEDLNKNKPKMDPKYGKTKKGSIMGSVAKGLLKKGGGFLAGLLGLMGNLLKGLLILPALSWLSKEENQDKVVKIIEVIGTIGKFIFDWAKFGITQTIDGLYSILSDDTSWWEKTIGFGKAIIGIGSLFLGLRWLTNPVKLAKDITRAVTTLVRILTKGGGRRMGGKGKGGSLKKLALGIGATVVTGVAINKLTESKEDSGDDKKEEKAKGGVVKGYSKGGWIQGPQSGYPVSLDGGKSTSFIGHGTEYVSMKSAGGQAFVTPYDTPATRKNPGLTAMRQAEAQRLGYAEGGEVSLKLNRKQFDALAFITAGEAQRNTNDEYGVAAAVLNRVADPRYPNTVQKVISAPGQYEAYNHGAKNDKALADKFVSIQGQLNIIKALNKLEGRTDFKGTSMYKHMGATDIKFSPKGNFYHYPEQRKKTDPKPDNIPTHYKKLISGDPVKAGELKSTGPGGYVPGETHTADGDPQQGGTGFPMGIFNKFLGAIRGIGLFDAGGETDRNGNPKDPKMLERLKRSHQGMKNGIKMMASGGQLDKLDFAKGAKRADTPEGMCVAGVIYTGEKNSAKIGDPE
Other Proteins in cluster: phalp2_38885
Total (incl. this protein): 3 Avg length: 754,7 Avg pI: 9,74
Protein ID Length (AA) pI
1VyAB 642 9,64500
A0AAF0CJX9 935 9,94768
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1184
8BL3N
 9 27,7% 555 3.056E-47
2 phalp2_13940
8CJpR
 7 25,1% 644 1.559E-36
3 phalp2_32642
22rML
 12 23,1% 549 8.119E-14

Domains

Domains [InterPro]

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage metaG-MbCM1
[NCBI] 		1079999 Kyanoviridae > Galenevirus > Galenevirus mbcm1
Host Synechococcus
[NCBI] 		1129 Cyanobacteria > Oscillatoriophycideae > Chroococcales >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
JN371769 [NCBI]
CDS location
range 8978 -> 11041
strand +
CDS
ATGGCAAAAGCAGCAGTACTAAAAGGAAGCAAGATTAACGTTTACAAATTAGTAACCGTTAAAGAACCTGATGCAAGACAAAAGAAGAAAGATCCTACTGGGTATGAGACTGCAAGAGGTCTGAATGCAACTACTAAAGCAGTTAATAACTTAGGTACCACTCTCAATGGTATTAACAAAATTGTTGGTGACCTTAAGCAAATAGAATTAGATCGTCTTGAAACTGCAAATAAAAATAAACCCAAGATGGATCCCAAGTATGGGAAAAGTAAGAAAGGTGGTGGTATACTAGGATCACTTGCAAAAGGATTTCTAAAAACTGGTGGTGGATTCTTATCAGGTCTATTAGGACTACTCGGTAACCTATTCAAAGCATTTGTAGTTCTTCCTGTTTTGACATGGTTAAGTAAAGAAGAAAATCAAGAGAAGGTTGCAGGTGCTTTAGAAGTATTGGCAAAGTTTGGTAAGTTCATATGGAACTGGGCAAGTTTTGGAGTTACCAATACAATTGATGGACTATATAAGTTACTTAGCGACGATTCGTCTTGGATGGATCGACTTGTTGGGTTTGGTCAAGCACTTTTAGGCGTTGGATCCATCTTCATCGGTTTAAAGGGTCTAAAATGGTTACTAAATCCTGTCAAAGTTGCTAAAGGTATTACAGCAGCAGTCAAAGCATTAGTTAAATTCGTAACGAAAAGAGGAAATCCATTGCGTATTCCAGGTAGAAGAAAAGGTGGGAAGGCAGCAGGTGGTTTAGTTACCGCTGCTGCTATAGCATTGCCACAGATGGCACAGGGTGGATGGATAACTGGACCCCAGTCTGGTTATCCTGTATCACTTGATGGTGGTAAAAGCACATCATTCATTGGTCATGGCACAGAGTATGTGTCACAGAAGTCAAGTGGTGGTGCATTTGTTACCCCGTATGATACTCCTGCAACCCGTAAGAATCCTGGGGTGACTGCTATGAGACAAGCAGAAGCAGCAAGAATGGGTTATTCTCAGGGTGGTGAAGTAAAAGAATCTCTTAATCTAACCGCAGATCAGTTCAGAGCACTTGCATATGGTGTGAGTGGTGAAGCACAACGCAATACTGCTGATGAGTATGGAACTGCAGCAGCAATCTTAAACAGAGTTGCAGATCCTAGGTACCCTAACAACATCATGGGCGTTCTTAGTCAGAACAATCCCGTTCAGTTTGCAGCATACTATGATGGTAGTATGCGCCACGAAGAGAAGTTACAAGAGAAACTTTCTTCTCAGGTAGGACAGACAGCAATCATTGCAGCACTAAGAGAACTTAAAGGTAGAGATAGTTTTAAAGGAACTGCCATGTACAAACACATGGGTTCCGATGACGTCAAGTTCTCTAGAAGAGGAAACTTCTATCATTATTCAGAACAACGAGGAAAGAATGATCCTCCTCCGTCATCTATCCCAACGCATTATCTAAAGTTCATTCAAAATCAACAGGCAGATCCAGATCAACAACCAAATGCTCCAGGTAATGATAGTGGAATAATGGGAGGGTTATCAAATGCTCTCCAAGGTCTTACTGGATTTCTTAGTAATGTATTCTTAGGAGGTCCTGCACAAGCAGCACCAATGCCACAAGTAGCACCACCACCTGCAAGGAAGGCGGAGTCAGCAGCAAATGATGGAGCAAGGGGAGTTTCAGTTGCTACTGGTGATATGGGAGAGAAAGTATTCCCACTTCCTAAAGGTAGATTTGAAGCAACAGCAAGGCAAATATTTGGTGCACCGAGAGATGGAGGATCACGGTCACACCTCGGTGTAGACTTAACTGAAGCATCTCCTTGGGGACCAGATCCAAAGATTCCTGTTGTTGCTGCTATTGCAGGATCAGTGTTAAGCGAAGAATATAAGGCAGGGCAGACATACCATTCAGGTGCGATGATTCGAGGTAAAGATGGTTATGACCAACGATACTTGCATATGGAACCTAGTGTAAAACCTGGGCAGGAAGTCAATGCAGGTGATCAGATCGGTAGACTTTATGATGATGGAATCAACAGTCACTTACACTTTGAGGTATACTAA

Gene Ontology

Description Category Evidence (source)
GO:0004222 metalloendopeptidase activity molecular function None (UniProt)
GO:0031640 killing of cells of another organism biological process None (UniProt)
GO:0042742 defense response to bacterium biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi00025346d5_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1VyAB) rather than this protein.
PDB ID
1VyAB
Method AlphaFoldv2
Resolution 60.59
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50