Protein

Protein accession
A0A7D3QMX8 [UniProt]
Representative
9RLm
Source
UniProt (cluster: phalp2_16604)
Protein name
Peptidoglycan metallopeptidase
Lysin probability
100%
PhaLP type
endolysin
Probability: 90% (predicted by ML model)
Protein sequence
MKDGFVKVSFKLNEDGNPLINPFDVFNQPAIEVGSPVGTITSKFGSMESFRTHSHTGIDYACPDGTPLYAPYDGVVTSVRDYGGESLGKAVFVKMEDGKQYTLGHLSNVDVKVGDKVSHGDLLAHSGNTGHSTGSHLHFGMFDSKGQTIDPGNIDFNSFQPITSAPPTPDMTDGISELLKGHNQPDVFTHADKVKDLHDRWNDLGGFMSEDTIAHHGFKWVGKYIFEPLGIAIKEGAHDILVATMHSLPLVLTCGGLVCFLLTIAIGNHKPYFYGLACWAGSAIMRVISHEMGI
Physico‐chemical
properties
protein length:294 AA
molecular weight:31819,6 Da
isoelectric point:5,71
hydropathy:-0,13
Representative Protein Details
Accession
9RLm
Protein name
9RLm
Sequence length
243 AA
Molecular weight
27623,24110 Da
Isoelectric point
5,15236
Sequence
MKVKLNGNDWYRLTTDFGDVSRIHPNGHTGIDLAIPEGTELYSPVDGVVKNIVDYGDKNLGKGIFIETNDNQTVIMGHLSEFKVEVGDVVKEGQIVALSGNTGRSTGAHLHLGMKDDSGNFINPDELIVTDLPQSSASGMSFNGIKDSWSDFWDFMKTWKEEGFFYAVYGKSFFEVVKDFFKELFRDISIFILKNGDIFFLAPAIIFMFGTFLVGRNKFTKWILPLWFFYFLSTFFYKMLAIE
Other Proteins in cluster: phalp2_16604
Total (incl. this protein): 23 Avg length: 235,5 Avg pI: 5,81
Protein ID Length (AA) pI
9RLm 243 5,15236
1H1LM 265 6,01541
2LBva 240 5,89309
39BQF 231 5,67710
3NcIx 249 5,39529
3OL2z 248 4,81264
4TrEH 256 5,71467
5BgXC 204 5,91764
5ioDn 232 6,70810
7LSCZ 231 5,96897
7aKxz 222 6,98991
7b0kn 240 5,98511
7pYR6 223 6,33183
7phNX 204 5,88655
8JmuG 240 5,36653
8m9VZ 211 6,74249
8m9rV 219 5,85882
8maaN 216 5,73542
8maxu 216 5,76651
CGm3 250 5,30344
PW31 241 5,48476
A0A3G3BW47 241 5,14293
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_29187
2my1
 38 39,5% 177 8.442E-49
2 phalp2_20323
2tcS7
 12 31,8% 154 1.079E-29
3 phalp2_14848
7w0BH
 74 32,1% 165 1.009E-24
4 phalp2_38873
1OvVW
 15 37,5% 165 1.617E-23
5 phalp2_27012
7nIRY
 3 31,5% 165 9.134E-15

Domains

Domains [InterPro]
PET_M23
Unannotated
Representative sequence (used for alignment): 9RLm (243 AA)
Member sequence: A0A7D3QMX8 (294 AA)
1 243 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage YungSlug
[NCBI] 		2736257 Herelleviridae >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
MT416612 [NCBI]
CDS location
range 126444 -> 127328
strand +
CDS
ATGAAAGATGGCTTTGTAAAGGTGTCATTTAAGCTTAACGAAGACGGAAACCCTCTAATTAATCCTTTTGACGTATTTAATCAGCCAGCGATAGAGGTTGGTTCACCAGTCGGAACGATAACGAGTAAGTTTGGTTCGATGGAAAGTTTTAGAACTCATTCCCATACAGGTATTGATTACGCTTGCCCAGATGGTACACCACTCTATGCCCCTTATGATGGGGTGGTGACCTCTGTAAGAGATTACGGTGGAGAAAGTCTTGGTAAAGCGGTGTTTGTAAAGATGGAAGATGGAAAACAATATACGCTTGGCCACTTATCTAATGTTGATGTCAAAGTCGGTGATAAAGTATCTCATGGCGACCTACTTGCTCATTCTGGAAATACAGGACACTCTACTGGTTCCCATCTCCACTTTGGGATGTTTGACTCTAAGGGACAAACTATCGACCCTGGCAATATAGACTTTAATTCCTTCCAACCAATAACCTCAGCGCCACCCACTCCAGATATGACAGATGGTATCTCTGAACTTCTAAAAGGTCACAACCAACCTGACGTTTTTACTCATGCCGATAAAGTAAAAGACTTACATGATAGATGGAACGATTTGGGAGGATTCATGTCAGAAGATACGATTGCCCACCATGGATTTAAATGGGTTGGGAAATACATCTTTGAACCTCTTGGAATAGCGATTAAGGAAGGTGCTCATGATATCTTAGTTGCTACGATGCATTCCCTTCCTTTAGTGTTAACTTGTGGTGGACTAGTTTGCTTCTTGTTAACGATAGCGATTGGAAATCATAAACCGTACTTCTATGGGCTTGCTTGTTGGGCTGGAAGTGCTATAATGAGGGTGATAAGTCATGAAATGGGAATCTAA

Gene Ontology

Description Category Evidence (source)
GO:0004222 metalloendopeptidase activity molecular function None (UniProt)
GO:0016020 membrane cellular component None (UniProt)
GO:0031640 killing of cells of another organism biological process None (UniProt)
GO:0042742 defense response to bacterium biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (9RLm) rather than this protein.
PDB ID
9RLm
Method AlphaFoldv2
Resolution 84.66
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50