Protein

Protein accession
A0A1V0DX14 [UniProt]
Representative
1Xb9t
Source
UniProt (cluster: phalp2_9665)
Protein name
Lysozyme
Lysin probability
100%
PhaLP type
VAL
Probability: 98% (predicted by ML model)
Protein sequence
MPRRHWSSTRPSSIRSRTPNDAVGGSVGKFSEEIIKSLKVTDARRNLRELQEALKDSVAAFNTIENQQGGTFATRFFGKNLGRGASKEMVAEIDKLIQAANEGEIEMVDLADRIDEVAEKFADGDDATRRYAEGLVSTANQIRDNAEAVRRAELVIKVLTGTVEEQEAALRELNGTVKESAASQQTAAEKAEAFNAALTAIKGTIPSVKEELDLLEQSQALEKMLQTAIQTAQSWSDVAAAIGLAGQAQAAIEAKLGQSVAGFAQGDTGVEAAASLLREFEGFRSTPYYDVNAFRTGFGSDTITLADGTIKKVTEGMRVSVADANRDLIRRIETEFAPSVARTAGADRFASFSPQQQAALISIAYNYGSIPDRIAEAVRTGTDQQIAAAIRSLGGDNNGVNRNRRNQEAALFAAGTNVEGEVRAQEKLDEDRARAAEARCGGTREGARVHSRTDREWQLRD
Physico‐chemical
properties
protein length:461 AA
molecular weight:49757,6 Da
isoelectric point:5,20
hydropathy:-0,46
Representative Protein Details
Accession
1Xb9t
Protein name
1Xb9t
Sequence length
225 AA
Molecular weight
24326,06140 Da
Isoelectric point
9,21403
Sequence
MNALDLIRGFESYRDKPYWDVNAFRAGYGSDTTTLADGRVVPIATGMAVSRDDAERDLSRRVTTEFMPRAISAVGQDAWNGMNEGQRSALLSITYNYGTLPRSVAEAVRSGDPRAASAAIIALGAHNNGVNKGRREKEAAIYAGLPPGGQSTDPQARSVTPVAYAYANGRMTPEDARLYERGMMEGLFPKIEAPTIEARRPRPAITPLQAAPVQNATPLRNYPGI
Other Proteins in cluster: phalp2_9665
Total (incl. this protein): 13 Avg length: 249,7 Avg pI: 6,19
Protein ID Length (AA) pI
1Xb9t 225 9,21403
1JSt4 238 5,62197
1KJhI 242 4,91853
1KPXx 240 5,95226
1L63W 249 5,92731
1LgGZ 249 6,61261
1bOcM 246 5,48356
1kCVx 206 6,58886
33tbO 215 6,12118
868OR 203 7,96631
8dHWq 249 5,53830
8mASb 223 5,36557
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3350
3enRM
 1 52,7% 148 1.641E-55
2 phalp2_39818
IOXK
 10 33,1% 163 4.342E-25
3 phalp2_1231
jMjk
 1 28,9% 169 1.865E-19
4 phalp2_37296
86Fqx
 3 32,2% 152 6.335E-17
5 phalp2_16325
5kZ2q
 25 28,8% 156 5.845E-13
6 phalp2_29852
3NQfa
 3 27,7% 162 3.250E-10
7 phalp2_20664
7DMXE
 3 25,3% 146 3.543E-09
8 phalp2_29676
8rhJg
 1 25,6% 156 1.568E-08
9 phalp2_26820
3R2a4
 10 23,9% 142 2.838E-08
10 phalp2_18164
4uApd
 5 23,4% 175 1.247E-07

Domains

Domains [InterPro]
Unannotated
Representative sequence (used for alignment): 1Xb9t (225 AA)
Member sequence: A0A1V0DX14 (461 AA)
1 225 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus virus S-ESS1
[NCBI] 		1964565 Casjensviridae > Sessunavirus > Sessunavirus SESS1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
KY249644 [NCBI]
CDS location
range 24578 -> 25963
strand +
CDS
ATGCCACGGAGGCACTGGTCGAGCACGAGGCCATCGTCGATCAGGTCAAGAACACCTAATGACGCTGTCGGCGGCTCCGTCGGAAAGTTCTCCGAAGAGATCATCAAGTCGCTCAAGGTGACGGATGCCCGGCGCAACCTTCGTGAGTTGCAAGAGGCCCTCAAGGACTCTGTCGCTGCCTTCAACACTATCGAGAACCAGCAAGGCGGCACGTTCGCCACGCGCTTCTTCGGCAAGAACCTCGGGCGCGGTGCGTCCAAGGAAATGGTCGCAGAGATCGACAAGCTGATCCAAGCTGCGAACGAAGGCGAGATCGAGATGGTCGATCTGGCCGACCGGATCGACGAAGTGGCCGAGAAGTTCGCCGATGGGGATGACGCTACCCGCCGGTATGCCGAAGGACTCGTATCTACGGCGAACCAGATCAGGGATAACGCAGAGGCCGTCCGCCGGGCTGAACTGGTGATCAAGGTTCTGACGGGAACGGTCGAAGAACAAGAGGCCGCGCTGCGGGAGTTGAACGGGACCGTCAAGGAGTCGGCGGCGTCCCAGCAGACGGCAGCCGAGAAAGCGGAGGCTTTCAACGCGGCCTTGACCGCGATCAAAGGGACCATCCCTTCCGTCAAGGAGGAACTGGACCTTCTGGAACAGTCGCAGGCATTAGAGAAGATGCTGCAAACTGCCATCCAGACCGCGCAGTCGTGGAGCGATGTGGCCGCTGCCATCGGCCTCGCCGGGCAAGCGCAAGCTGCGATTGAAGCAAAGCTGGGGCAGTCTGTTGCTGGGTTCGCACAGGGCGATACTGGCGTCGAAGCTGCTGCAAGCCTGCTGCGGGAGTTCGAGGGTTTCCGTTCGACCCCTTACTACGATGTCAACGCCTTCCGAACTGGCTTTGGATCAGACACGATCACGCTTGCAGATGGCACGATCAAGAAGGTCACGGAGGGTATGCGGGTCTCTGTGGCTGATGCCAACCGTGACCTCATTCGCAGGATCGAGACTGAGTTCGCGCCCTCCGTGGCCCGCACCGCTGGGGCCGATAGGTTCGCCAGTTTCTCGCCGCAGCAGCAAGCCGCGCTGATTTCCATTGCATATAACTATGGCAGTATTCCTGACCGAATTGCAGAAGCAGTCCGCACTGGCACCGATCAGCAGATTGCAGCCGCGATCCGTAGCCTCGGGGGAGACAACAACGGGGTCAACCGCAACCGTCGGAACCAAGAGGCCGCGCTGTTTGCTGCCGGAACCAACGTCGAGGGGGAAGTCCGGGCACAGGAGAAGCTGGACGAGGATCGTGCTCGCGCTGCGGAGGCGCGCTGCGGAGGAACGAGAGAAGGAGCGCGCGTCCACAGCAGAACGGATCGAGAATGGCAACTTCGAGATTGA

Gene Ontology

Description Category Evidence (source)
GO:0003796 lysozyme activity molecular function None (UniProt)
GO:0009253 peptidoglycan catabolic process biological process None (UniProt)
GO:0016998 cell wall macromolecule catabolic process biological process None (UniProt)
GO:0031640 killing of cells of another organism biological process None (UniProt)
GO:0042742 defense response to bacterium biological process None (UniProt)

Enzymatic activity

EC Number Entry Name Reaction Catalyzed Classification Evidence Source
3.2.1.17 None Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. match to sequence model evidence used in automatic assertion
ECO:ECO:0000256 		RuleBase:RU003788

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1Xb9t) rather than this protein.
PDB ID
1Xb9t
Method AlphaFoldv2
Resolution 73.73
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50