Protein

Protein accession
M4SKY3 [UniProt]
Representative
1UBAd
Source
UniProt (cluster: phalp2_31094)
Protein name
Phage tail lysozyme domain-containing protein
Lysin probability
100%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MATTPKARLYKMITPPTVKGGITVKVGGKTVAGPMDGMTTMIKATNSIGATTNSIAIIVQKMNESFATQMQMQIQQQQELADAREEGVQRLIDQRKDEQDDINRKKDKQDDLDAENKQEGQGGTSLSYKAGAIVGAVSNAFGFFEGIARFLGNVFKTIVSYAILKWIANPENTKKVKKMIEGVANIGKFLLKVAGWIVSMGLGGLGAFMENPLSFKGIFGIVKFITALGLFFAPAKMAKLGLKAVMSLFKGGKLFKIIGSMMKNLMKVFKGIVAFCAARPRAALILGGAILATWGLKALLDKDEEAAGDELEKDDKEQKNNDKKNWLGSLFGGNKDDKKEETPEKGSEESYEQWRRNYDASDTTINGLKEGDEGFEDALKKSWLGEQQNQIEGNSARITGKEAEGLEFDDGTEGKPEMAKGGWISGPQSGYPVSLDGGKSTAFIGHGTEYVAAPKAASGGAFVVPFDTPATRRDPSLTGRRMNEAGKMGFGLPGFSMGGLLDFIAKGEGGYNSMNQGTMFGRIVGSTHDAKSKLGKNLTDMTLREVMGLQRSRKLFAAGRYQIIPTTMRWIVDKMKLPAGSTFNSSLQDKMGEGLIKHKRPYAWNYIKGKHDDERGAMLALAREWASLPHPDTGKSVYGFGNKALHSVDEVRKALNDARGTQPEKEQSGLQKLWQGIKDRFSNKDQVQADPKQTSVNSGTTIDNNAVTEEVSTGSGDGNVNVTTGDVAPIEAGSGQNPTDMKPDPPIFIDNKYEPPANDYFRTRYGMMAEANTEPVEMF
Physico‐chemical
properties
protein length:779 AA
molecular weight:84614,3 Da
isoelectric point:8,83
hydropathy:-0,49
Representative Protein Details
Accession
1UBAd
Protein name
1UBAd
Sequence length
896 AA
Molecular weight
94870,03770 Da
Isoelectric point
9,39564
Sequence
MAQARLYKMITPPKFKGGGITVKVGDKIVTQPAAGYAKSIAATNSLGASVNSIAIMVEEMKDSFAQYTFKNMELRESMMKQREDYIKDEKKRIKDAKRAAIRQAGLVKDRASEKVQEKKTNKEEDKQTIGAAKKSVGFFEGIAGLIKQIFKSLLIYTVLDWMSKPENQGKLKKIFKALRSMFEAFVKIADFLVTFGLDGLVEFLENPLSFKGIFGLLKFITVLGAIFAPVALAKFGLAAGGAIMKLVKGGGLKKMLMGLFRGIGGMVKGLIAFVKGMGLGGMLALGAGAIVVGTAVAAVNANQDGTAVIEDPDDPNKSQADEIRESGGMTGAPISAEMLGFARGGPLPQFAAGGWIHGPQSGYPVSLDGGRSTAFIGHGTEYVATKADGGGLGKAFVVPFDTPATRGNPGLTNTRLAEASRSGFGLPMPFSKGGEIPQMFLGGMIDGAKNLLGLNKTMDPVLFGLAKKGVGMSVNMLGGNPDYWKKPESQRSIEDMAREVASKSQVLKRGGQDKVHVTKEPMGSGTSKGSKNAATGPQKIDIAKVFQNMGGADLMGSYISDMGEAANKAKGGFVKGCTWCNKKRMAAGGLLDFIASGEGGYNSMNQGTRGGRIVGSTHNASEILGKNLTDMTVGEVMSQQSSGKLFAAGRYQIIPDTMKYIVKEMNIDKEAKYDKSLQDKLGVGLIKYKRPYAWQYIQKQHNDENGALLELAREWASLPDPATGESVYGNGNKALHSVAEVKAALNGARGGAAMVSDDPNLNLASAQTPGQGSDSPAGTQADPEVAQGPKKIDPMSIFNNLGGKELMQSYIDDINNDGKGTKISDAALAKKEAQAERQNGTQVSTQQLPDQPPPPVEPPPPVVAGNSGGYKNPASDFLMPRMGWLSDISTPPKSLT
Other Proteins in cluster: phalp2_31094
Total (incl. this protein): 39 Avg length: 782,9 Avg pI: 8,31
Protein ID Length (AA) pI
1UBAd 896 9,39564
111oK 778 9,15008
1RoKn 707 8,37491
1ST55 779 8,91064
1SVZq 811 9,01218
1TI3y 690 9,07323
1TPQ6 725 7,09023
1UE7M 813 4,80627
1UPbz 900 9,23634
1UU7H 815 8,82825
1UwuH 708 8,90336
1VIrs 747 6,26766
1Voun 698 6,56322
1W0Zu 757 8,73813
1WaoB 756 8,77320
1Wcls 752 6,65445
1WvRQ 757 8,63601
1g0W8 771 6,53293
1kupv 819 9,26851
22qIL 902 9,08677
2N8h 786 9,18863
2SWIW 826 8,81033
2UhL0 667 8,98987
36boT 754 5,71194
3L9EL 779 8,91064
3M2KE 994 9,21532
3aPhS 829 9,01598
3xf6A 726 8,14321
7TjBq 779 8,91064
7oLZ2 726 7,09035
89gsf 904 9,15665
8AQSB 779 8,91064
8CBFI 904 9,15665
8EJa0 707 8,37491
8LUZE 779 8,82741
8u3LF 781 8,88086
8uvnJ 708 8,54072
poOK 745 6,11908
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_38449
1fLhQ
 12 30,0% 1223 7.083E-142
2 phalp2_1947
4upJo
 19 26,1% 861 3.617E-53
3 phalp2_40218
2qjSX
 23 28,2% 702 4.494E-45
4 phalp2_6778
81ulx
 3 21,8% 796 5.899E-23

Domains

Domains [InterPro]

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-RSM6
[NCBI] 		929832 Kyanoviridae >
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
HQ634193 [NCBI]
CDS location
range 178339 -> 180678
strand -
CDS
ATGGCAACAACACCAAAAGCACGATTATATAAGATGATAACTCCACCAACGGTGAAGGGTGGAATTACTGTGAAAGTTGGTGGTAAGACAGTTGCTGGTCCTATGGATGGTATGACCACCATGATAAAGGCAACTAATAGTATAGGTGCCACTACTAATAGCATTGCTATCATTGTACAGAAGATGAATGAATCTTTTGCTACACAGATGCAAATGCAGATACAGCAACAACAAGAATTAGCAGATGCAAGAGAAGAAGGAGTACAAAGATTAATAGATCAGAGAAAGGATGAGCAAGACGATATAAACAGAAAAAAAGATAAACAAGATGATTTAGATGCAGAGAATAAGCAGGAAGGTCAAGGTGGAACATCACTTTCATATAAAGCAGGTGCCATTGTCGGTGCTGTTTCTAATGCATTTGGTTTCTTCGAAGGTATTGCAAGGTTCTTAGGAAATGTCTTTAAAACAATTGTTAGTTATGCAATACTGAAATGGATTGCTAATCCTGAGAACACCAAGAAAGTCAAGAAGATGATAGAGGGTGTTGCTAATATTGGTAAGTTCTTACTTAAAGTTGCAGGTTGGATAGTCAGCATGGGACTGGGTGGACTGGGTGCTTTCATGGAAAACCCCTTGAGTTTTAAAGGTATATTTGGTATAGTAAAATTCATAACTGCATTGGGTTTATTCTTCGCACCTGCAAAGATGGCGAAGTTGGGACTGAAGGCAGTCATGTCTCTCTTTAAGGGTGGTAAACTCTTTAAGATAATTGGTAGTATGATGAAGAACCTGATGAAGGTTTTTAAAGGTATAGTAGCGTTCTGTGCTGCTAGACCTAGAGCAGCTCTCATCTTAGGAGGTGCTATACTTGCTACATGGGGTCTAAAAGCACTACTTGATAAGGATGAAGAAGCAGCAGGAGATGAATTAGAAAAGGATGACAAAGAACAAAAAAATAATGATAAAAAGAATTGGCTTGGTAGTTTATTTGGTGGGAATAAAGATGACAAAAAGGAAGAAACACCAGAGAAAGGATCAGAAGAATCTTATGAGCAATGGAGACGAAATTATGATGCTTCCGATACAACTATAAATGGTTTAAAAGAAGGTGATGAAGGTTTTGAGGATGCATTAAAGAAAAGTTGGTTGGGGGAGCAACAGAATCAAATAGAAGGCAACTCCGCAAGAATTACTGGTAAAGAAGCAGAAGGATTAGAATTTGATGATGGAACAGAAGGAAAGCCAGAAATGGCAAAAGGTGGATGGATATCAGGTCCTCAATCTGGTTATCCCGTCAGTCTTGATGGTGGCAAATCAACTGCCTTCATTGGGCATGGAACAGAGTATGTTGCTGCTCCCAAAGCAGCAAGCGGGGGTGCTTTCGTAGTACCGTTTGATACTCCCGCAACTAGAAGAGATCCAAGTCTGACTGGTAGAAGGATGAATGAAGCAGGTAAAATGGGATTTGGACTACCTGGATTTTCTATGGGTGGACTCTTAGACTTTATTGCTAAGGGTGAAGGTGGATATAACTCCATGAACCAAGGTACTATGTTTGGTCGTATTGTTGGTAGTACTCATGATGCAAAATCAAAACTTGGTAAGAACCTGACTGACATGACTCTTCGTGAAGTTATGGGACTTCAGAGAAGTCGTAAATTATTTGCTGCAGGTCGTTATCAGATCATACCTACTACTATGAGGTGGATCGTTGATAAAATGAAACTCCCTGCAGGTTCTACGTTTAATTCATCATTGCAAGATAAGATGGGTGAAGGTCTTATAAAACATAAGAGACCATATGCTTGGAACTATATTAAAGGTAAGCATGATGATGAGCGTGGTGCAATGCTTGCACTAGCTAGAGAGTGGGCTTCTTTACCACATCCTGATACAGGTAAATCTGTTTATGGTTTTGGTAACAAGGCACTTCATAGTGTTGATGAAGTTAGAAAAGCACTTAATGATGCAAGAGGTACTCAACCAGAGAAGGAACAAAGTGGACTACAGAAGTTATGGCAGGGAATAAAGGATAGATTCAGTAATAAAGATCAAGTTCAGGCTGACCCTAAACAGACATCAGTCAATAGTGGTACCACTATAGATAATAATGCTGTGACAGAAGAAGTCTCTACTGGTAGTGGAGACGGGAATGTTAACGTTACTACGGGTGATGTGGCTCCAATCGAAGCTGGTAGTGGACAAAATCCAACAGATATGAAACCTGATCCACCCATATTCATTGACAATAAGTATGAACCACCAGCTAATGATTATTTCCGTACTAGATATGGAATGATGGCAGAAGCAAACACCGAACCAGTTGAGATGTTCTAA

Gene Ontology

Description Category Evidence (source)
GO:0016020 membrane cellular component None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi0002c18054_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1UBAd) rather than this protein.
PDB ID
1UBAd
Method AlphaFoldv2
Resolution 54.30
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50