Protein

Protein accession
A6MAB7 [UniProt]
Representative
84gv6
Source
UniProt (cluster: phalp2_20203)
Protein name
Gp053a
Lysin probability
100%
PhaLP type
endolysin
Probability: 84% (predicted by ML model)
Protein sequence
MFDKDAIKKDMLKLAEQFEGHPVDYDAKDGPQCADFSAFLIKNTTGKTIWGNAIETDNKENINIINENPNVEAKHVDPHEIAEGDLLVESNSNPKVGHVSLIDKIHDDGTVTVYEQNLDGDATGPNPLGVQKHTRKLADFDGWGRVMGALRIEAIPEEKQWVRNPNSRRNGQLQRAGSRQGGAYSSITSLYEQLGMTFK
Physico‐chemical
properties
protein length:199 AA
molecular weight:22087,3 Da
isoelectric point:5,25
hydropathy:-0,72
Representative Protein Details
Accession
84gv6
Protein name
84gv6
Sequence length
152 AA
Molecular weight
16721,43260 Da
Isoelectric point
5,29975
Sequence
MVELSSPKRKMLKLAKAYLGKKVDFDNQDGPQCADLSAFLIKNATGATIWGNAIETDDKSNIDIINKSGHKARRISPNEKPQAGDLLVEDTGDDVGHVSIIESVEKDGKVTVYEQNYNGDAETNPKGVEKRTRNTADKDGWGKVEGYLRIED
Other Proteins in cluster: phalp2_20203
Total (incl. this protein): 6 Avg length: 168,0 Avg pI: 5,15
Protein ID Length (AA) pI
84gv6 152 5,29975
7ZBy2 153 4,66298
83ERT 152 5,77634
8LPx2 199 5,24797
8oAgL 153 4,64962
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25333
7ocj2
 56 34,8% 135 1.014E-12
2 phalp2_27772
7kL3N
 52 34,2% 108 3.260E-09
3 phalp2_568
Omza
 65 30,4% 128 3.861E-08
4 phalp2_24452
4BMZo
 66 28,3% 148 2.776E-04
5 phalp2_27292
4fIza
 10 29,0% 110 9.326E-04

Domains

Domains [InterPro]
CHAP
Representative sequence (used for alignment): 84gv6 (152 AA)
Member sequence: A6MAB7 (199 AA)
1 152 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05257

Taxonomy

  Name Taxonomy ID Lineage
Phage Chopinvirus KSY1
[NCBI] 		388452 Chopinvirus >
Host Lactococcus lactis
[NCBI] 		1358 Firmicutes > Bacilli > Lactobacillales > Streptococcaceae > Lactococcus >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
DQ535032 [NCBI]
CDS location
range 30786 -> 31385
strand +
CDS
ATGTTCGATAAAGATGCAATCAAAAAGGACATGCTTAAACTAGCAGAACAATTTGAAGGACATCCTGTTGACTATGATGCAAAGGATGGTCCTCAATGTGCTGACTTTTCTGCATTCCTTATTAAAAATACTACTGGTAAAACTATCTGGGGTAATGCAATTGAAACAGATAACAAAGAAAATATCAACATTATCAATGAAAACCCAAATGTTGAAGCCAAACATGTTGACCCACATGAAATTGCTGAAGGTGACTTGTTAGTCGAATCTAATAGTAACCCGAAGGTCGGTCACGTTTCTCTTATTGATAAAATTCATGACGATGGTACAGTAACTGTCTATGAACAAAACTTGGATGGTGATGCTACCGGCCCAAACCCACTGGGTGTACAAAAGCATACTAGAAAGTTAGCTGACTTTGATGGCTGGGGTAGAGTAATGGGTGCATTACGTATCGAAGCTATACCTGAAGAGAAACAATGGGTACGCAACCCTAATTCTCGTCGTAACGGGCAACTGCAACGTGCGGGTAGCCGACAAGGTGGAGCCTATTCTAGTATCACTAGTCTATATGAACAGTTAGGTATGACGTTTAAGTAA

Gene Ontology

Description Category Evidence (source)
GO:0001897 symbiont-mediated cytolysis of host cell biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi0001577f4d_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (84gv6) rather than this protein.
PDB ID
84gv6
Method AlphaFoldv2
Resolution 92.24
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50