Protein

Protein accession
M1TVD2 [UniProt]
Representative
5qZ08
Source
UniProt (cluster: phalp2_13616)
Protein name
Phage tail lysozyme domain-containing protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MMYLVESAMLALLSFFNSAPEPAVAIPVVPYEASWKCPDCSEEEQYVLAELQDNTKISDRNALATIMGNIKQESTFKANICEGGARVNYEDCHDGGYGLIQWTSINRYNNLGKFCTEYGCDPSTLEGQTRFMINESQFQSVLPVFEGRGQTVYEYMKSAYVWLGWGIEGQRTNYAYDYVKRLEWV
Physico‐chemical
properties
protein length:185 AA
molecular weight:21079,5 Da
isoelectric point:4,57
hydropathy:-0,33
Representative Protein Details
Accession
5qZ08
Protein name
5qZ08
Sequence length
246 AA
Molecular weight
27875,23520 Da
Isoelectric point
7,51624
Sequence
MIRKFLISSSIVLSGALGALNAAISQEYKFEVPSKKSNKNNNIKFNPWIPAAALAGFSLQFVPGLQISYADDKGKVYDYAKEESIELVKVEEEKQWKCKGCSAEEQYVLSFIQKNTLIDDKNALATLMGNIKQESMFLSNICEGGARVPYNQCHSGGFGLIQWTTHARYDGLGYFCNKYSCDPSTLEGQVRYMINENQFQSNLAYFEGSGQSINYYMNAAYRWLGWGIHGNRTSYAYDYLNRMTWC
Other Proteins in cluster: phalp2_13616
Total (incl. this protein): 118 Avg length: 195,3 Avg pI: 7,02
Protein ID Length (AA) pI
5qZ08 246 7,51624
1Be0b 179 8,54762
1DRB 215 5,78600
1N22Z 184 8,47451
1UCH1 189 8,08151
24ffG 188 6,15051
26qlO 215 6,23537
2KDWi 201 8,07855
2TzXo 186 8,95680
2gXx1 208 6,42732
36cyQ 193 8,40173
3M10o 177 8,62859
3U4xH 202 6,70668
3Ucbp 198 8,10975
3VnM4 201 8,07848
4Ezq 201 8,72220
5yF7K 215 6,89323
8g79Y 189 8,39399
Ddvc 201 9,15601
gV4p 194 7,53596
tayf 235 8,46723
xLY 208 8,07533
yBc0 173 6,13772
A0A0E3HCR0 165 4,78939
A0A0E3FDR5 193 5,27059
M4QF70 198 4,86408
A0A0E3FK30 215 5,67341
E3SJN0 189 4,93626
M4SLP9 193 8,47355
V5URH4 213 6,71885
C7BV17 201 9,13783
A0A1D8KNU5 180 8,62892
A0A1D8KS75 133 9,41975
A0A385EFM1 201 7,53142
H6WG88 199 8,45105
A0A0E3HES0 202 7,56518
A0A127KMB1 234 9,23982
A0A127KM43 210 9,13783
A0A0E3I5T3 196 5,09189
A0A0E3FHR4 195 5,46987
A0A0E3HD40 197 4,96644
A0A1D7SPT1 195 5,03715
A0A0E3HD20 195 5,25661
A0A0E3HZE4 195 5,25661
A0A0E3HS43 195 5,11707
Q6H954 198 8,81297
A0A1D8KS26 197 5,74752
A0A1D7SN43 189 4,93626
A0A1D7SQI7 190 5,34329
H8ZMV6 197 5,94845
A0A0E3HVT9 197 5,46077
A0A0E3EPI3 165 5,40263
A0A2S1GL80 203 9,04293
E3SPS7 229 8,58669
A0A1D7SDE4 199 7,48322
A0A1D7SNI0 190 5,34329
Q0QZ12 195 8,73677
A0A1D7SKW9 189 5,05011
A0A1D7SWZ7 190 5,34329
R9TPV8 191 6,82326
A0A1D8KN94 194 4,90955
M4NK23 171 6,87896
A0A1D7SES1 198 7,48322
E3SJB2 190 8,71073
M4R1J3 198 5,60327
M4SK79 196 6,09834
R9TPH6 194 4,99697
A0A3G3M601 193 8,16597
A0A0E3FN03 205 6,13278
A0A0E3HBK9 195 5,29992
A0A1D8KTG5 201 9,13764
A0A1D8KJ75 198 5,48732
A0A346FKG7 175 6,29517
A0A0C5AIN0 162 5,37364
A0A0E3F3M8 165 4,78939
A0A0E3F6A4 185 5,09007
A0A0E3FF86 195 5,46987
A0A0E3G7M0 195 5,25661
A0A0E3HBP3 196 5,09189
A0A0E3HT97 195 5,25661
A0A127KMY3 194 6,58721
A0A1D7SAA7 203 9,13783
A0A1D7SJM1 189 4,93626
A0A3G3M6P8 201 7,58797
A0A482ICU1 201 8,41346
A0A482MNL8 209 8,92599
A0A4Y5P133 201 8,41346
A0A514AB70 201 8,41346
A0A6G8R767 201 9,00025
A0A6M2ZHL6 201 5,89980
A0A6M5CCK1 190 8,94616
G8EY93 194 4,99697
H6BIG1 203 9,13783
H6BJ23 203 9,13783
H6T577 203 9,13783
M4SL03 195 8,73677
M4SSR3 203 9,13783
M4T3D7 200 4,96133
A0A0E3FAS1 194 5,56837
A0A1D7SFJ7 196 5,61248
A0A1D7SHK1 194 6,58721
A0A1D7SLU7 189 4,93626
A0A873WAX5 203 8,74638
A0A873WD74 187 5,96482
A0A8S0HVT9 180 5,73530
A0A8S0HY36 198 6,88828
A0A9X9JWP1 202 8,67624
A0AA50EYM9 198 5,15009
A0AA50EYP7 195 7,54813
A0AA50EZ52 175 7,49100
A0AA50EZX6 177 8,61344
A0AA50F067 175 8,39986
A0AA50IFB0 199 8,25493
A0AAE9VF57 200 9,06975
A0AAE9ZQC7 195 8,09602
A0AAF0CE54 195 8,44357
A0AAU8EK48 200 9,06975
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_8003
5mdkv
 2142 55,7% 201 5.249E-89

Domains

Domains [InterPro]
Disordered region
Phage_lys2
Representative sequence (used for alignment): 5qZ08 (246 AA)
Member sequence: M1TVD2 (185 AA)
1 246 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-SSM6b
[NCBI] 		682651 Kyanoviridae > Greenvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
HQ316603 [NCBI]
CDS location
range 109927 -> 110484
strand -
CDS
ATGATGTACCTAGTTGAGAGCGCCATGCTCGCTTTACTTTCTTTCTTTAATTCAGCACCAGAACCTGCTGTCGCTATTCCAGTGGTTCCTTACGAGGCATCTTGGAAGTGTCCAGACTGTTCTGAAGAAGAACAGTACGTTCTTGCTGAACTACAAGACAATACAAAAATTTCTGATCGTAATGCCCTTGCAACTATCATGGGCAACATCAAACAAGAGTCTACATTCAAGGCAAACATCTGTGAAGGTGGTGCTCGTGTGAATTACGAGGACTGTCATGATGGTGGTTATGGTTTGATTCAATGGACTTCTATCAACCGATATAATAACCTCGGAAAATTCTGCACCGAGTATGGTTGTGACCCTAGCACTCTAGAGGGACAGACTCGTTTTATGATTAATGAAAGTCAGTTCCAATCTGTTCTTCCAGTGTTTGAAGGACGTGGACAGACTGTTTATGAGTACATGAAGTCTGCTTACGTCTGGTTGGGATGGGGTATTGAAGGACAGCGAACTAACTATGCTTATGATTACGTCAAGCGTCTAGAATGGGTATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi0002c0d884_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5qZ08) rather than this protein.
PDB ID
5qZ08
Method AlphaFoldv2
Resolution 76.63
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50