Protein

Protein accession
G9BW84 [UniProt]
Representative
4s1ni
Source
UniProt (cluster: phalp2_2246)
Protein name
Peptidase M23
Lysin probability
99%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MNQKLEERIKDFEEQLDDAYFWLFVVAFYMCYTVVKFGIPSPQVPQSSTATSSQTVTLGKDAPKFIYPHSTPYPVTSGFGMREHPVTGGQKMHNGIDFAAPSGANILAVADGQVSFAGDMGGCGNAVEINHSGGYLSKYCHALKVLVQKGQSVKAGTPIALVGTTGTSTGNHLHLGIKLNGKYIDPKKVIPIMEPKK
Physico‐chemical
properties
protein length:197 AA
molecular weight:21178,1 Da
isoelectric point:8,67
hydropathy:-0,16
Representative Protein Details
Accession
4s1ni
Protein name
4s1ni
Sequence length
200 AA
Molecular weight
21415,25200 Da
Isoelectric point
8,63607
Sequence
MLNRKLEERIRDCEEQLDDAFFWIFITCLLLGFGILKFNQSSPQVSSPQSTESSQTSTVTLGKDAPKFIYPHSTPYTISSGFGMREHPVTGGQKMHNGIDFAAPGGANILAVADGQVSFAGDMGGCGNAVEINHSGGYLSKYCHASKVLVQKGQSVKAGTPIALVGTTGTSTGNHLHLGMKLNGKYIDPKKVIPIMEPKK
Other Proteins in cluster: phalp2_2246
Total (incl. this protein): 19 Avg length: 198,7 Avg pI: 8,39
Protein ID Length (AA) pI
4s1ni 200 8,63607
1JMFp 198 8,85791
1LMt7 200 7,71415
1WOnd 198 8,46916
1WOwF 198 8,85791
1pcXv 193 8,53666
4NnAf 198 7,79605
4pR94 198 8,31076
53TfL 200 8,63607
59Hl0 207 9,02952
5CnIx 198 8,63607
5fQGR 205 8,96989
5hCxZ 203 7,04362
5y4UZ 197 8,45685
8Hchl 197 8,67166
8mjYK 196 7,80114
8nUSZ 195 8,44344
8nVDI 198 7,79605
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21998
4ZChj
 22 48,8% 129 1.015E-33
2 phalp2_35838
4GGll
 4 43,0% 130 8.138E-32
3 phalp2_19030
17y4D
 9 48,4% 126 2.543E-30
4 phalp2_18941
3wghU
 6 35,3% 198 1.480E-28
5 phalp2_20604
4H0aV
 4 42,9% 128 8.576E-27
6 phalp2_12
4LMlP
 4 38,7% 142 1.421E-25
7 phalp2_27996
15l2O
 11 38,8% 152 4.945E-25
8 phalp2_2494
5Ecd6
 8 41,9% 131 3.207E-24
9 phalp2_15605
2kb3q
 80 38,6% 132 1.114E-23
10 phalp2_5756
7Czmx
 45 38,0% 134 2.077E-23

Domains

Domains [InterPro]
Disordered region
PET_M23
Representative sequence (used for alignment): 4s1ni (200 AA)
Member sequence: G9BW84 (197 AA)
1 200 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Planktothrix phage PaV-LD
[NCBI] 		994601 No lineage information
Host Planktothrix agardhii HAB637
[NCBI] 		598707 Cyanobacteria > Oscillatoriophycideae > Oscillatoriales > Planktothrix >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
HQ683709 [NCBI]
CDS location
range 85383 -> 85976
strand -
CDS
ATGAATCAGAAACTGGAGGAGAGGATAAAGGATTTTGAGGAACAGTTGGATGACGCTTATTTCTGGCTTTTCGTTGTTGCTTTTTACATGTGTTATACAGTTGTTAAATTCGGAATACCCTCTCCCCAGGTTCCTCAATCCTCAACAGCAACATCATCACAAACAGTCACGCTAGGAAAGGACGCGCCCAAATTTATCTACCCCCACTCAACCCCCTACCCAGTAACTTCTGGTTTTGGCATGAGAGAACATCCTGTAACGGGAGGACAAAAAATGCACAACGGAATTGACTTCGCCGCCCCATCGGGTGCAAATATTCTGGCTGTTGCCGATGGGCAAGTCTCGTTTGCGGGGGATATGGGGGGATGCGGTAACGCAGTCGAGATCAATCATTCCGGTGGCTACCTGTCCAAATATTGCCACGCCTTGAAAGTTTTAGTTCAAAAGGGTCAATCAGTCAAAGCGGGCACTCCTATTGCCTTAGTAGGTACGACGGGAACCTCGACCGGAAATCATCTGCACTTGGGCATAAAACTCAACGGAAAATACATCGACCCTAAAAAAGTTATCCCTATAATGGAGCCAAAAAAATGA

Gene Ontology

Description Category Evidence (source)
GO:0004222 metalloendopeptidase activity molecular function None (UniProt)
GO:0016020 membrane cellular component None (UniProt)
GO:0031640 killing of cells of another organism biological process None (UniProt)
GO:0042742 defense response to bacterium biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
G9BW84
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
upi000243c96a_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (4s1ni) rather than this protein.
PDB ID
4s1ni
Method AlphaFoldv2
Resolution 83.75
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50