Protein

Protein accession
F4N9V8 [UniProt]
Representative
6Oe3B
Source
UniProt (cluster: phalp2_4978)
Protein name
TtsA-like Glycoside hydrolase family 108 domain-containing protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MSNFDTCMKFTGLAEGGYTNLPGDPGGETNYGISDNRDGVRDGMVSGVPGAPGPVPVKQLTHDQALAIYRRDYYAPIRGDALPLPVAVAVFDYAVNSGVGTAAKALQRACSVTVDGKIGPATVAQAKSLNARSLAQSVCNLRVQMLEQSTAPGVVKYRAALIARAKRCAAFAQTL
Physico‐chemical
properties
protein length:175 AA
molecular weight:18260,6 Da
isoelectric point:9,14
hydropathy:-0,04
Representative Protein Details
Accession
6Oe3B
Protein name
6Oe3B
Sequence length
265 AA
Molecular weight
27125,46810 Da
Isoelectric point
9,37288
Sequence
MLNNFPACWRITSAYEGGYTANKADPGNWTGGKVGVGELKGTNMGISAAAFPNLDIKNLTAAQAMTIYQKKYWDAVRGDDLPAGLDLATWDYGVNSGPGRAARDLQAVVGAGVDGKIGDQTVAKAKAVNGVKAIQALCAKRLGYLQHLAIWNTFKGGWSARVASVEAKAVAMFLAASPSSTPETVKAALAQEATQANGKAVSAQSAAAAAATTAAPVTAVAVQSSHVWYWVAAAAAAVLVGGAILIERHKHAARSAAYAEAAANV
Other Proteins in cluster: phalp2_4978
Total (incl. this protein): 241 Avg length: 244,0 Avg pI: 9,27
Protein ID Length (AA) pI
6Oe3B 265 9,37288
10TpB 170 4,66673
11JHL 264 9,84756
19I4a 281 9,53541
19xpN 255 9,53573
1Cx5K 265 9,73938
1EfFq 250 9,59588
1GC02 255 10,11233
1GC0d 256 9,95503
1J6ih 266 9,39003
1KUfs 271 9,71959
1KtDO 271 9,69116
1QR0T 252 9,96734
1QnYZ 276 9,56184
1XnEu 243 9,70683
1XtAQ 243 9,70683
1Y4sx 244 9,47532
1Y4uA 244 9,64062
1Y5e8 241 9,71811
1bWsC 250 9,68078
1cBNF 175 9,05898
1d8Va 306 9,62772
1dg3d 306 9,67640
1fQiB 250 9,38984
1fRaL 256 9,05286
1fUS5 249 10,26551
1hIGJ 250 9,44122
1klCg 250 9,67002
1kvVW 256 9,11049
1lMSf 302 9,13744
1ljg1 279 9,92705
1oDZd 273 9,22435
1oXhO 252 9,86536
1omQo 254 9,60755
1pCDi 249 10,00183
1pDmu 247 9,53354
1pE53 163 8,56148
1r05Z 253 9,86490
1r2d9 264 10,01022
1rqUE 249 9,44573
1rqq7 264 9,09683
1rrH8 249 9,57467
1rtgk 249 10,29826
22AmH 257 9,36469
24A3R 249 10,23611
25hoX 252 9,55726
2FrwB 269 9,23421
2G4A6 250 9,65248
2GtVj 255 9,49569
2IxO6 259 8,88440
2Ukyv 250 9,87348
2VCyq 161 8,00809
2Vyxc 273 9,64926
2WCP0 249 9,44573
2cGr1 249 9,92525
2cHiA 250 9,83422
2e5ay 242 9,47784
2mEo6 249 9,92660
2prlG 248 9,98353
32KVp 178 9,58099
33u5g 181 5,54717
346Hl 167 9,09154
35no 269 9,23421
36Dq5 254 9,82622
36V6L 284 9,91996
3MlUf 273 8,60970
3OL0O 273 9,07413
3ObiU 261 9,81281
3Oxpg 260 9,70541
3VsR8 250 9,49228
3e4rT 253 9,81268
3eqY6 253 9,51568
3hvvY 262 9,63965
3jEa1 242 9,64719
3zUxG 175 4,74977
40wgR 248 9,88940
48Rxh 252 9,29932
4CbL4 251 9,74660
4FJru 268 9,44102
4JkYU 249 9,73648
4Krr4 259 9,76897
4Lh2j 237 9,87509
4Ls9p 237 9,95516
4Ltvi 244 9,87870
4MDTg 244 9,82738
4MEwy 292 6,20428
4MLe6 244 9,95800
4MMm2 206 9,62154
4Mvbp 244 9,64062
4MxLF 243 9,75827
4OVeG 254 9,99216
4QTy2 265 9,29707
4Qw8i 252 9,74757
4SViq 244 9,69477
4TwJF 237 9,84279
4U2ch 250 10,25971
4U2fJ 258 9,73300
4U2z9 254 9,74551
4VXve 247 9,43548
4YKKB 258 9,27547
4Zaf2 248 9,96083
4ZyGQ 252 9,63250
4nYt1 250 9,68040
4o0Ed 250 9,87438
5Ja7e 166 5,58940
5JltH 247 9,29848
6CLAs 241 9,59388
6D5jx 241 9,80907
6DHc9 296 9,04171
6DV0W 242 9,85317
6DVbt 241 9,69477
6Deyc 241 9,64906
6Df6M 246 8,64761
6DkF9 296 9,50910
6Dolb 241 9,73139
6DqC6 246 8,33823
6Dr8I 246 9,67066
6Dsd1 268 9,15304
6DxDI 241 9,77671
6Dy1Y 242 9,58833
6E1h1 241 9,77671
6EXck 234 9,60045
6EYZh 293 9,29881
6Erz5 295 9,17483
6EsZ9 241 9,65648
6EuX3 260 9,31589
6Fnmj 295 9,28185
6GG1F 251 9,08129
6HYK1 178 5,16851
6I68s 166 5,37102
6I8cp 175 5,36784
6IXHa 241 9,65648
6IYUP 241 9,66118
6IZ8t 295 9,57376
6Iivo 186 6,12187
6Jg2m 179 4,69288
6JgtX 205 4,86885
6KmYj 241 10,05199
6KsOb 242 9,65861
6LfF5 256 7,82113
6LglL 170 5,12338
6N9UI 241 9,72572
6PAzS 249 9,57376
6Pr1T 244 9,53392
6PuBf 244 9,70444
6PuVi 249 9,72430
6QdCA 249 9,75860
6R6cM 248 9,79309
6R9w9 270 9,68072
6RBVP 254 9,42620
6RWxD 162 8,88331
6RsC5 249 9,69277
6SrUv 250 9,40034
6SuJ5 276 9,86516
6Tx6v 170 6,77063
6UaGX 249 10,19975
6UgKS 249 9,32434
6Uy3b 175 4,72562
6VuZe 249 9,79657
6WVB6 244 9,42375
6WVJV 283 9,82087
71z1p 267 9,99919
72wgi 249 9,75860
750Fe 250 9,51368
75H39 251 9,61148
78HHX 244 9,53663
78hwK 250 9,72037
78t9m 249 10,38355
79wnc 249 9,62341
7BwUJ 214 10,04600
7BwVG 213 10,39496
7BwVL 213 9,91732
7BwXe 213 10,12007
7Bx0V 212 10,12355
7Bx2B 213 9,80205
7Bx2K 214 10,22328
7Bx3U 214 10,10711
7Jnzw 272 9,56680
7Jq0m 272 9,49814
7LFhD 258 9,48228
7Tdox 258 9,49137
7XVPS 167 9,02636
7bbx8 248 9,94085
7c9hN 255 9,75782
7cR32 250 9,75163
7cXBq 250 9,41401
7dQYx 248 9,78290
7dR13 248 9,93537
7dx4r 248 10,00486
7dyGg 244 9,57338
7es3W 250 9,40034
7fVo5 249 9,97373
7gQUA 250 9,41375
7gQUS 246 9,39242
7lOyk 273 9,72701
7mb4D 242 9,74673
7nLD6 245 9,76614
7p2Ct 245 9,49756
7pnSG 249 10,08816
7pnSa 254 9,61722
7r7Zb 248 9,87103
7rNOG 261 9,76408
7rNTX 267 9,64036
7rNW7 266 9,37649
7rQDt 261 9,85465
7rUd7 261 9,65532
7srPY 250 9,51368
7tIQq 250 9,49228
7tV4h 250 9,70702
7tasJ 250 9,65609
7u8WZ 244 9,14170
7u9a9 170 5,87769
7urrl 238 9,53927
7vGS8 248 9,78290
7vGTa 248 9,67014
7wHhG 250 9,83074
7wIZW 188 9,05041
7wy87 267 9,67124
7wyaJ 244 9,68884
7xmGj 219 9,81268
7ygPK 250 9,57679
7ymY9 252 9,51394
7z1kt 242 9,63320
7z5dN 265 9,62476
7z7tl 249 9,68542
80GNr 245 9,90784
86Ux 213 6,52144
8E0P9 257 10,03600
8EwiT 174 4,99259
8GYQp 249 9,74970
8hBkg 250 9,88328
8oIWZ 272 9,70573
8zR1F 174 5,42695
Imyb 265 9,72527
XZjw 170 4,66673
cIH6 258 9,34709
f3BV 258 9,48228
jI2c 250 9,49228
lUZf 275 9,60058
va4X 167 6,96627
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1403
1nDVZ
 22 41,0% 256 5.994E-70
2 phalp2_14059
8aO3S
 400 41,8% 172 5.398E-69
3 phalp2_18877
1MrjM
 564 36,8% 250 1.011E-68
4 phalp2_37851
4LyyS
 5845 43,9% 173 1.706E-67
5 phalp2_12946
360Ik
 1926 39,5% 172 2.326E-64
6 phalp2_21492
8pawf
 134 41,6% 204 4.324E-61
7 phalp2_34743
3e4sK
 352 44,1% 170 5.311E-60
8 phalp2_17741
7qInl
 84 43,1% 160 4.766E-59
9 phalp2_20698
4XKIk
 408 39,4% 170 1.835E-56
10 phalp2_23908
1Le4q
 257 35,9% 167 1.644E-55

Domains

Domains [InterPro]
GH108
Representative sequence (used for alignment): 6Oe3B (265 AA)
Member sequence: F4N9V8 (175 AA)
1 265 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05838

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage LIMEzero
[NCBI] 		943335 Autographiviridae > Waewaevirus > Waewaevirus limezero
Host Pantoea agglomerans
[NCBI] 		549 Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pantoea > Pantoea agglomerans group

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
FR751545 [NCBI]
CDS location
range 41707 -> 42234
strand +
CDS
ATGTCCAACTTCGATACATGCATGAAATTTACCGGGTTAGCCGAAGGCGGGTACACTAACCTGCCCGGCGACCCAGGAGGCGAAACAAACTATGGTATATCCGATAATCGCGATGGAGTACGTGACGGCATGGTCTCGGGTGTCCCTGGAGCGCCTGGCCCTGTTCCTGTTAAGCAGCTTACGCACGACCAGGCACTCGCCATCTATCGCCGAGATTACTACGCCCCCATCCGTGGCGATGCGCTACCGCTGCCGGTTGCCGTCGCTGTCTTCGACTACGCGGTCAACTCCGGTGTCGGTACTGCAGCTAAAGCTCTACAGCGGGCCTGCTCAGTTACTGTAGACGGTAAGATTGGTCCCGCTACTGTGGCCCAGGCCAAGAGCCTGAATGCCCGGTCCCTGGCTCAGTCCGTCTGCAACCTCCGCGTCCAGATGCTGGAACAGAGTACTGCACCTGGCGTGGTGAAGTACCGCGCTGCCCTGATTGCCAGGGCTAAGCGTTGTGCTGCCTTCGCTCAAACCCTGTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi00020c0f6c_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6Oe3B) rather than this protein.
PDB ID
6Oe3B
Method AlphaFoldv2
Resolution 89.69
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50