Protein

Protein accession
A0A2K9V574 [UniProt]
Representative
3o2bs
Source
UniProt (cluster: phalp2_31446)
Protein name
Lysin
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKKALVASSMVLGLAFGVQVANADTYTVQAGDTVSKIAYQHGTTVNDIVAQNQLSNPNLIYVGDKLEISAPAVNYQTYTQAPVKEQAQTPVEQPKATQVQQQQTQPVQSAQRQVQKPQVQQPQEQQQVQQPQSNQSSVMSKTSGQLSQAEINQVAQEMSSRTGESSATWSMIINRESRGNVNISNSQGSGAFGLFQNMHISSGNVGTQVDKAVQLYHAQGIQAWQQTAY
Physico‐chemical
properties
protein length:229 AA
molecular weight:24852,2 Da
isoelectric point:6,83
hydropathy:-0,58
Representative Protein Details
Accession
3o2bs
Protein name
3o2bs
Sequence length
237 AA
Molecular weight
25819,54680 Da
Isoelectric point
5,14333
Sequence
VCGYTNGRFAEIIGKNKIEFQLICDAENFIEKAEKYGLQVVNYPTLGGIMVWRKGDISSRADGAGHVAIVERIDSANQIYTSESAYNGSAFYNATRTNNNGRWGMGSAYAFRGCIVNPAIGDVHYSERTPEPSNVTTYTVQAGDTLSEIAVKFGTTVDNLVALNNIENPDLIRTGQVLKINGSDTNVGSITYTVKTGDNLSKIASKYGTTWEAIYEKNKDIIGDDPDIIQPGQILKI
Other Proteins in cluster: phalp2_31446
Total (incl. this protein): 6 Avg length: 240,7 Avg pI: 8,04
Protein ID Length (AA) pI
3o2bs 237 5,14333
3gTAa 261 9,55159
A0A1S5RCR7 242 8,83238
A0A2P0ZKW9 233 9,04815
A0A2Z2E9B5 242 8,83238
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_21652
2Vk4c
 5 37,1% 307 2.022E-41
2 phalp2_5632
4k4fw
 4 31,4% 226 2.556E-19
3 phalp2_33156
7DPYX
 1 31,4% 216 1.002E-17

Domains

Domains [InterPro]
CHAP
LysM
LysM
Representative sequence (used for alignment): 3o2bs (237 AA)
Member sequence: A0A2K9V574 (229 AA)
1 237 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476, PF05257

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage Satyr
[NCBI] 		2070201 Maenadvirus > Maenadvirus satyr
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
MG744354 [NCBI]
CDS location
range 37636 -> 38325
strand +
CDS
ATGAAAAAAGCATTGGTAGCAAGTTCAATGGTACTAGGTTTAGCATTCGGAGTTCAAGTGGCCAACGCAGACACTTACACTGTCCAAGCTGGAGATACTGTTAGTAAAATTGCTTACCAGCACGGGACGACTGTTAATGATATTGTTGCACAGAACCAATTGAGCAACCCAAACTTGATTTATGTTGGCGACAAGTTGGAAATCAGCGCACCGGCAGTTAACTACCAAACTTATACGCAAGCACCTGTTAAGGAGCAGGCACAAACGCCGGTCGAGCAACCTAAAGCGACACAGGTGCAACAACAGCAAACACAACCAGTTCAATCAGCACAACGACAAGTACAGAAGCCACAAGTGCAACAACCACAGGAACAACAACAAGTACAACAACCACAAAGTAATCAGAGTTCTGTTATGTCTAAAACTTCTGGTCAGTTGAGTCAAGCGGAAATTAATCAAGTGGCACAGGAAATGAGTTCACGTACTGGCGAATCGTCAGCAACATGGTCGATGATTATTAATCGTGAATCCCGTGGCAATGTCAATATTTCAAATTCGCAAGGGAGCGGAGCTTTTGGCTTATTCCAAAACATGCACATTAGTAGCGGTAACGTTGGTACACAGGTTGATAAAGCAGTTCAGCTCTATCATGCACAAGGAATCCAAGCTTGGCAACAAACAGCATATTAA

Gene Ontology

Description Category Evidence (source)
GO:0003796 lysozyme activity molecular function None (UniProt)

Enzymatic activity

EC Number Entry Name Reaction Catalyzed Classification Evidence Source
3.2.1.17 None Hydrolysis of (1->4)-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrins. N/A UniProt

Tertiary structure

PDB ID
upi000cdbb8d4_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3o2bs) rather than this protein.
PDB ID
3o2bs
Method AlphaFoldv2
Resolution 77.22
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50