Protein

Protein accession
W6E9P7 [UniProt]
Representative
4Trrv
Source
UniProt (cluster: phalp2_23201)
Protein name
Tail assembly protein
Lysin probability
100%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MFGAEVEKEIMKYCKSHAPNEACGFINSSNEFVPIKNISSEPEKAFKMKKGSVPDDAKALVHSHPGGPFCPSEADMQQQIVTDIPWGICCFNERHQETFWFGDNVPMPPLIGRGFRHGVTDCYALIRDFYRAIHDIVLPEFPRNWEWWENNKTLYEDGFESAGFHSVNINEILPGDVFLATIPKSTTPNHGGIYLGDGLILHHCAARQPYAPDRLSVVDPAVRWMSYVTKVLRHEDDTISRAVGQKVWA
Physico‐chemical
properties
protein length:249 AA
molecular weight:28161,6 Da
isoelectric point:5,75
hydropathy:-0,36
Representative Protein Details
Accession
4Trrv
Protein name
4Trrv
Sequence length
160 AA
Molecular weight
18882,61480 Da
Isoelectric point
8,97395
Sequence
MRYQMQLAIPFVVMCWPLYDVFWWGDQLAPSPLIGRGFRHGVHDCYSLLRDYYVEKFGVRLIDEPRDWNWWDDKQGLDLYRQHFDAAGFRVIDKREATQVGDGLLMSFNYRVPMHGAVVWDNDLILHHPAGMKPVDPTRLSVVAPRSRFIRHVALALRRK
Other Proteins in cluster: phalp2_23201
Total (incl. this protein): 17 Avg length: 187,5 Avg pI: 6,00
Protein ID Length (AA) pI
4Trrv 160 8,97395
2lmHD 132 6,19297
4c57h 141 6,47762
4yYsK 138 6,06054
5D3ce 151 6,61790
5hghx 136 4,98901
6N1oT 165 7,86432
6REMw 151 5,09621
8Bzmo 138 4,94536
8kxXo 227 6,19706
vig1 131 5,28878
V9QKQ8 279 5,11837
A0A2I6PHT8 244 5,82943
A0A481W6P3 245 5,84893
A0A7G7WXW9 251 5,11428
A0A975YYJ7 250 5,57860
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_20055
1yh76
 36 48,3% 153 3.618E-56
2 phalp2_14456
4GZZ7
 1941 37,1% 164 9.932E-50
3 phalp2_10001
6WaO6
 89 37,5% 157 3.507E-49
4 phalp2_27124
2S85x
 12283 37,1% 164 3.284E-45
5 phalp2_16601
8Ajl
 621 30,4% 161 2.712E-43
6 phalp2_30311
4w8xT
 423 41,8% 129 3.067E-41
7 phalp2_33889
1NGRy
 1 67,6% 105 2.685E-30
8 phalp2_8226
7u1LL
 5 35,3% 130 6.239E-29
9 phalp2_18066
3JA4t
 92 30,6% 147 9.545E-27
10 phalp2_15655
2TlsE
 4 33,3% 135 5.670E-25

Domains

Domains [InterPro]

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage vB_RglS_P106B
[NCBI] 		1458697 Rigallicvirus > Rigallicvirus P106B
Host Rhizobium gallicum
[NCBI] 		56730 Proteobacteria > Alphaproteobacteria > Rhizobiales > Rhizobiaceae > Rhizobium >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
KF977490 [NCBI]
CDS location
range 22862 -> 23611
strand +
CDS
ATGTTCGGTGCAGAAGTCGAAAAAGAAATAATGAAATATTGTAAGTCGCACGCTCCAAACGAAGCATGCGGCTTTATCAATTCCAGCAACGAATTCGTGCCGATCAAGAATATTTCGAGCGAACCGGAAAAAGCCTTTAAGATGAAAAAAGGCAGCGTTCCGGACGATGCTAAAGCGTTGGTGCACTCGCATCCAGGCGGGCCGTTTTGCCCGTCCGAAGCGGACATGCAACAGCAAATCGTAACCGATATCCCTTGGGGAATTTGCTGCTTTAATGAGCGTCATCAAGAAACGTTTTGGTTTGGTGATAATGTTCCGATGCCGCCACTAATCGGACGCGGTTTTAGACACGGTGTAACAGATTGTTATGCGTTGATCCGCGATTTTTACCGTGCAATTCATGATATTGTTTTGCCTGAATTTCCGCGAAATTGGGAATGGTGGGAAAACAACAAAACGCTTTATGAGGACGGCTTTGAAAGCGCTGGTTTCCACAGTGTCAACATCAACGAAATATTGCCGGGTGATGTTTTCTTAGCTACTATCCCGAAATCCACCACGCCCAACCACGGCGGGATTTACTTAGGTGACGGTTTGATTTTACATCATTGCGCCGCACGTCAACCTTACGCACCAGACCGTTTAAGTGTTGTTGATCCTGCTGTTCGATGGATGAGCTACGTAACGAAAGTTTTAAGACATGAAGACGATACAATTAGCCGGGCGGTTGGCCAAAAGGTTTGGGCGTGA

Gene Ontology

Description Category Evidence (source)
GO:0001897 symbiont-mediated cytolysis of host cell biological process None (UniProt)
GO:0006508 proteolysis biological process None (UniProt)
GO:0008234 cysteine-type peptidase activity molecular function None (UniProt)
GO:0008235 metalloexopeptidase activity molecular function None (UniProt)
GO:0008270 zinc ion binding molecular function None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4Trrv) rather than this protein.
PDB ID
4Trrv
Method AlphaFoldv2
Resolution 94.52
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50