Protein

Protein accession
G4KK23 [UniProt]
Representative
3PWv2
Source
UniProt (cluster: phalp2_35708)
Protein name
Phage K1E myramoyl peptidase
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MGDISTHFNRKEFACKCGCGFNAVDKELLEVIEDVRTHFGKPLIINSANRCESHNAKEGGSKNSQHLKGMAADIRINGVTPNSVATYLLNKYPNKYGIGMYNTFTHIDVRTVKSRWDYR
Physico‐chemical
properties
protein length:119 AA
molecular weight:13426,1 Da
isoelectric point:9,12
hydropathy:-0,56
Representative Protein Details
Accession
3PWv2
Protein name
3PWv2
Sequence length
361 AA
Molecular weight
40419,37440 Da
Isoelectric point
8,05663
Sequence
MRIKGIDVSKWQGKIDWQKVANDGIEFVFVRIGNRGLTSGKISEDPYWKQNIEGALAVGLDVGVYIYCTSINEAEATEEAIFVLERIAPYKITMPVVFDYEGISNPNNRNYGMSQSQITSCYRVFANLVEASGYSSLMYGSKAYLPKKFDLANTDDLLWVARYAGKNSVLDDEKYFPHITGYDDRIAIWQYANNGTVAGINAKVDLNYMYIDVRKDVEKTEEKEQEEMTISQEVKAYSKAKDGTKKLSANFKVKEFACKDGSDPVFIAPSLVEVLQKIRTHFGKAVNINSAYRTPTYNKKIGGATYSQHCYGTAADIRISGVKPKDVAAYVETLMPNCGGIGIYSNFIHVDVRATKSRWNG
Other Proteins in cluster: phalp2_35708
Total (incl. this protein): 29 Avg length: 196,0 Avg pI: 8,59
Protein ID Length (AA) pI
3PWv2 361 8,05663
1gCUE 339 9,11630
1gDmD 340 7,09120
1gG6E 368 5,70558
3PyrT 440 8,73967
3v5fk 363 8,46156
7Kz0j 312 9,08986
ocQB 374 8,77481
A0A2K9V3X1 137 9,78870
A0A6G9W2T5 165 9,73390
A0A858NIV8 130 9,21906
A0A858NL66 128 8,95867
A0A858NM43 130 9,35831
A0A858NN73 130 9,26303
A0A858NNP9 123 9,51619
A0A858NNQ6 129 9,43787
A0A858NP32 130 9,18450
A0A858NV36 129 9,41530
A0A8S5LUH9 122 6,41777
A0A8S5M622 92 9,61812
A0A8S5RLK9 131 7,75661
A0A8S5SIU2 130 9,53818
A0A8S5VDB7 215 9,21371
A0AAF0ASB8 130 5,61566
A0AAU8AVU0 131 7,79366
A0AAU8AX11 131 7,78722
A0AAU8B2B9 127 9,07845
A0AAU8B2V9 127 8,16926
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_9994
3h23S
 34 36,7% 378 2.903E-78
2 phalp2_6199
5X5xO
 102 35,7% 224 2.287E-68
3 phalp2_26548
858CP
 728 33,1% 223 5.825E-68
4 phalp2_3425
3TK4D
 923 37,0% 224 5.161E-67
5 phalp2_29740
1rkWk
 100 35,8% 223 1.320E-61
6 phalp2_33310
6kV0o
 68 36,0% 230 9.494E-57
7 phalp2_12280
7cwxI
 12 21,1% 477 1.276E-49
8 phalp2_27173
3dR30
 17 24,8% 249 5.980E-49
9 phalp2_36883
7sfSC
 39 31,2% 227 2.801E-48
10 phalp2_30592
67VKs
 21 30,4% 230 3.897E-46

Domains

Domains [InterPro]
GH25
PET_M15
Representative sequence (used for alignment): 3PWv2 (361 AA)
Member sequence: G4KK23 (119 AA)
1 361 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF08291

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiR1-37
[NCBI] 		331278 No lineage information
Host Yersinia enterocolitica
[NCBI] 		630 Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Yersinia >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
AJ972879 [NCBI]
CDS location
range 45243 -> 45602
strand +
CDS
ATGGGTGATATTTCAACTCACTTTAATAGAAAAGAATTTGCATGTAAATGTGGATGTGGTTTTAATGCCGTAGACAAAGAGCTATTAGAAGTAATTGAAGATGTTCGTACTCACTTCGGGAAACCATTGATTATTAATTCAGCTAATCGTTGTGAAAGCCATAATGCTAAAGAAGGCGGTTCTAAGAACAGCCAACATCTTAAAGGTATGGCAGCGGATATTCGCATTAATGGCGTAACTCCTAATTCAGTAGCGACCTATTTACTTAATAAATATCCTAATAAATATGGTATCGGTATGTATAATACTTTTACTCATATTGATGTAAGAACTGTTAAGTCTAGATGGGATTATCGTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi00022dbd00_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3PWv2) rather than this protein.
PDB ID
3PWv2
Method AlphaFoldv2
Resolution 92.36
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50