Protein

Protein accession
A0A096VL47 [UniProt]
Representative
5kBvg
Source
UniProt (cluster: phalp2_40675)
Protein name
Phage tail lysozyme domain-containing protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 78% (predicted by ML model)
Protein sequence
MAPQNKWFAASPNTDYIYKALTDGTVAKLTGGRIPTMNAAQAAGLVGSWLIETGRKDLRNLDVVEAGTGRGRGLSQYTGVRRTPYDKAVKQARAAGQDPNSAQWQIKYFAQEYMNKDLIGWTKVFEKMPKNLKTPGEYAKYFTGSAAEGKGYFRPGVPHTDRRMQAADEVFRHYAAPNRQAPANRPAPAGTPAIKPGPLKQLMNRLGIRGQDQGFAIDKLSRNLGSIAAAPNAGRAIFNSIAPGGNSQWKSLSKADKQAWNTAAGQIGAQFGIAINPPTRNIGLPTKTNVGVNQSFGPKPVNLTIRGVQPGDLGYGTNNTRVGGLPGLREVAQAGIHNYNWKPDKNWNSYTNPHYNVSRSSVHNRAGSNLRGSGGLSTSSGAYSGLSVGGYGSGNSAYRGGSVSYGSGSVATGTGMGSISRGAGW
Physico‐chemical
properties
protein length:425 AA
molecular weight:45049,9 Da
isoelectric point:10,28
hydropathy:-0,58
Representative Protein Details
Accession
5kBvg
Protein name
5kBvg
Sequence length
433 AA
Molecular weight
45823,39980 Da
Isoelectric point
9,73513
Sequence
MSPKTGRWFAATPNTDYIFKALTDGTVQQLTANRIPKMTPAQAAGLVGSWIIETGRPGLQNLDVVEQGSGRGRGLSQYTGVRRGPYDQAVAAARAAGKDPNSAQWQLEYFAKEYLNKDLIGWTRVFENAPKSGSPADYAKYYTGSAQQGTGYFRPGVPHWDRRMQAATEVFRHYTGQATAAPKPTTPAASTQSGTNPLDGILKKLGIKGGPQSFNTDKIQYVAGLIADSKAVKSDVGLAIFASRAPNFEALADYAKKWKSMGASQRSAWNSVGQSLGITNQIFQKGTTYQMPKSLSIGSGVSSYKPQSPVAPKTTSFETPDFLQDHGYQASTANQTYRGGLPGLKEIAQAGIANYKDFTNRSAGYGAAAYGMTNSTIGGINSRSYGTSMDLGQSLGIRGGAGSAASAAASGGYTWASTASAGNSWQGSYGYSK
Other Proteins in cluster: phalp2_40675
Total (incl. this protein): 9 Avg length: 408,3 Avg pI: 9,91
Protein ID Length (AA) pI
5kBvg 433 9,73513
1O8Hc 421 9,77413
5lfSp 412 9,99436
5uq2O 420 9,93608
5zr3c 338 9,96238
6IAN7 389 9,48938
6Mkfi 412 9,71824
7Qnl1 425 10,27789
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13751
6LD2z
 1 26,2% 427 4.029E-29

Domains

Domains [InterPro]

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBP2
[NCBI] 		756277 Autographiviridae > Kembevirus > Kembevirus SCBP2
Host Synechococcus sp. CB0208
[NCBI] 		255252 Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
KC310806 [NCBI]
CDS location
range 42206 -> 43483
strand +
CDS
ATGGCTCCGCAAAATAAATGGTTTGCGGCGTCACCCAATACTGACTACATCTATAAGGCCCTCACAGATGGGACGGTCGCCAAACTTACTGGTGGCCGTATTCCCACAATGAATGCCGCCCAAGCGGCTGGCCTCGTTGGCTCCTGGCTGATCGAGACCGGTCGTAAGGATCTCCGCAACCTTGATGTAGTTGAGGCCGGCACTGGCCGTGGCCGTGGCCTCTCCCAGTACACAGGCGTTCGTCGAACCCCATACGATAAAGCTGTTAAGCAGGCTAGGGCTGCAGGACAAGACCCTAACTCTGCTCAATGGCAGATCAAGTACTTCGCTCAGGAGTACATGAACAAGGACCTGATTGGTTGGACCAAGGTCTTTGAAAAGATGCCCAAGAACCTCAAGACCCCTGGAGAGTACGCCAAGTACTTCACAGGATCAGCTGCAGAGGGTAAGGGCTACTTCCGTCCGGGAGTACCTCATACTGATCGCCGGATGCAGGCAGCTGACGAGGTGTTCCGTCACTATGCAGCCCCAAATCGTCAGGCCCCGGCGAATCGACCGGCCCCAGCCGGAACTCCAGCAATCAAGCCGGGGCCTCTCAAGCAGCTAATGAACAGGCTGGGGATCAGGGGCCAGGATCAGGGCTTCGCGATCGACAAGCTCTCGCGGAACCTGGGCAGCATCGCTGCAGCCCCGAATGCCGGACGCGCCATCTTCAACTCAATCGCTCCAGGTGGTAATAGCCAGTGGAAGTCGCTGAGTAAGGCCGATAAGCAGGCCTGGAACACAGCTGCTGGACAGATCGGTGCTCAGTTTGGTATTGCCATCAACCCTCCCACTCGGAACATTGGCCTCCCAACTAAAACCAATGTCGGGGTCAACCAGTCCTTCGGGCCTAAGCCTGTAAATCTAACCATCCGTGGCGTTCAGCCGGGTGATCTGGGCTACGGGACCAACAATACCAGAGTTGGTGGCCTCCCCGGTCTCCGCGAGGTAGCTCAGGCTGGCATCCACAACTACAACTGGAAGCCTGATAAGAACTGGAACTCCTATACCAATCCCCACTACAACGTATCCCGTTCCTCTGTCCATAACAGAGCGGGTTCAAACCTCAGGGGTTCAGGTGGCCTGTCCACTAGCTCAGGTGCTTACAGCGGCCTGTCTGTTGGTGGGTATGGATCTGGTAACTCCGCCTATAGGGGTGGCTCTGTCTCCTACGGAAGTGGCTCTGTCGCCACTGGTACGGGTATGGGCTCCATCTCTAGAGGCGCTGGCTGGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5kBvg) rather than this protein.
PDB ID
5kBvg
Method AlphaFoldv2
Resolution 56.17
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50