Protein

Protein accession
A0A088F6W1 [UniProt]
Representative
1qpne
Source
UniProt (cluster: phalp2_22549)
Protein name
Peptidoglycan hydrolase
Lysin probability
100%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MSFFPSEGNGGIFAQGAFTIDPNSTPEMIQAKRAQLAALMPQYGRAKYVGEGIGQLATGIATGRKNKALDKFEGERRQEAAGAFNNLMTGQGSATPRSSGPLSILGIAPQEQPSTPEQGIADDAMKAIGKPAQGGGREAFIEQMMPHAMRVAQETGLDPRIIIAQAAQETGWGKSAPGNNYFGIKSHGKSGGNTFATNEVIDGKTVRINDSFRGYEGMGDSVDGYAQFLQENPRYREMLSAGDLDGQLAALGKSGYATDPNYAQSVGSIARSIQVPTQGGSFAPGAGTQVAQAGGPALNDLMMLAQNPYMSPQQRSVINMQIQQAQRQQQMQQERQWAQQDPKYQIELEQARLNLEQDRAGTGANSTKVQSSVVLDDGTSVLVMNDGSRRVLSPTGDAVQGQEAADAIRSAREYTVDNQRDIYGARRTGTLEADVDLAGAAKGAEELGKASIAAGVSAWEDYGKLQSSIGTIGEAITAIDNGADSGMIAKYLPNVTEASASLNNAMDRMGLDVVGSVTFGALSEGELRLAMNTAVPRDLSPPELRSWLTKKQAAQQKAATMLSDAAQYLTRPGNTINGWIDKNKASTPIASPEEAAAPSAASSSAPDQAPIDFTSDTPMPGLSEDDAGLWGYATPEERQAIWGN
Physico‐chemical
properties
protein length:644 AA
molecular weight:67982,7 Da
isoelectric point:4,82
hydropathy:-0,48
Representative Protein Details
Accession
1qpne
Protein name
1qpne
Sequence length
263 AA
Molecular weight
27456,41470 Da
Isoelectric point
8,79905
Sequence
MSGAAGAFGAFASGLAGSYERKQDREYRKERDAKLDEYMARREGLVTPEPVSLGVDGAAPVLASASPAPVTATTIPAAPGGRSGPSASFQGGGNKDAFIEAMMPHALRVSEATGLDPRLVIAQAAQETGWGRSAPGNNFFGIKSHGRKGGSNLATQEVINGQRVTVRDSFRGYADMGESADDYAAFLKSNPRYSDMLAAKDLDGQIAALGRSGYATDPNYARSVASIANSIPMPARPMAPPEAITVETLKNRWPRPLGVGGPT
Other Proteins in cluster: phalp2_22549
Total (incl. this protein): 11 Avg length: 312,9 Avg pI: 8,18
Protein ID Length (AA) pI
1qpne 263 8,79905
1JJQe 285 9,20559
1KBq5 296 9,14118
1LYpL 285 9,02830
1LzJ8 285 9,04371
4KUkC 241 5,91406
4KlLu 281 9,58382
6DDur 310 8,79782
7cegs 254 9,60832
7w2Qm 298 6,01848
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_18196
4HCMO
 3 48,0% 179 1.032E-63
2 phalp2_28852
56cnG
 1 39,1% 194 2.865E-34
3 phalp2_28059
7c5fX
 9 39,5% 182 3.102E-30
4 phalp2_6270
6Jhn7
 19 38,9% 172 5.000E-29
5 phalp2_2026
2muJS
 52 34,7% 164 1.502E-25
6 phalp2_2210
4f9X6
 94 28,8% 177 6.445E-19
7 phalp2_34505
4LEw1
 3 29,1% 175 1.981E-13
8 phalp2_21175
10nuX
 1 26,9% 163 3.500E-08

Domains

Domains [InterPro]

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfitobacter phage NYA-2014a
[NCBI] 		1526550 No lineage information
Host Sulfitobacter sp. CB2047
[NCBI] 		1525218 Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Sulfitobacter >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
KM233261 [NCBI]
CDS location
range 13491 -> 15425
strand -
CDS
ATGAGTTTTTTCCCTTCTGAGGGCAACGGGGGCATTTTCGCGCAAGGTGCTTTCACGATCGACCCAAACAGCACGCCCGAGATGATCCAGGCGAAGCGCGCGCAACTCGCCGCGCTGATGCCGCAGTATGGGCGTGCGAAGTACGTAGGCGAGGGCATCGGGCAGCTTGCTACGGGTATCGCCACAGGCCGCAAGAACAAGGCGCTGGACAAGTTTGAGGGCGAACGCCGGCAAGAGGCTGCGGGCGCGTTCAATAACCTGATGACAGGTCAGGGCTCGGCAACGCCGCGCTCGTCTGGCCCTCTCAGCATCTTGGGAATTGCACCGCAAGAACAGCCGTCCACGCCCGAGCAGGGAATCGCAGACGACGCCATGAAGGCAATCGGAAAGCCCGCGCAAGGCGGGGGCCGCGAAGCATTCATTGAGCAGATGATGCCGCACGCAATGCGCGTGGCGCAGGAAACGGGCCTAGATCCCCGCATTATCATCGCACAGGCGGCGCAGGAAACGGGCTGGGGCAAGTCGGCCCCGGGTAATAACTATTTCGGCATCAAGTCGCACGGCAAGTCAGGCGGCAACACCTTTGCGACGAACGAAGTCATCGACGGCAAAACGGTGCGTATCAACGACAGCTTTCGCGGCTATGAAGGCATGGGCGATAGCGTTGACGGGTATGCGCAGTTTTTGCAGGAGAACCCGCGATATCGGGAAATGCTTTCGGCTGGTGACCTTGACGGGCAGTTGGCGGCGCTTGGCAAATCTGGCTACGCTACAGACCCAAATTACGCGCAGAGTGTTGGATCGATCGCCCGAAGCATCCAAGTCCCCACGCAAGGCGGCTCATTCGCTCCAGGTGCCGGCACGCAGGTAGCACAAGCCGGCGGGCCCGCGCTGAACGACCTGATGATGCTTGCCCAAAACCCATATATGAGCCCGCAACAGCGAAGCGTCATCAATATGCAGATACAGCAGGCACAGCGTCAGCAACAGATGCAGCAGGAGCGCCAGTGGGCACAGCAAGACCCGAAATACCAAATTGAGTTGGAACAAGCGCGCCTTAACCTCGAACAGGACCGCGCAGGGACGGGGGCTAACTCCACAAAGGTGCAATCCAGTGTTGTCCTTGACGATGGCACATCCGTTCTGGTCATGAACGACGGTAGCCGTCGTGTCCTTTCCCCAACTGGGGACGCCGTACAGGGGCAGGAGGCGGCTGACGCTATTAGATCCGCGCGCGAATACACTGTCGACAATCAGCGAGACATTTACGGGGCTCGTCGCACAGGGACGCTTGAGGCAGACGTTGACCTCGCCGGCGCGGCTAAAGGGGCAGAAGAGCTTGGCAAGGCGTCCATCGCTGCGGGTGTCTCGGCATGGGAGGATTACGGCAAGCTGCAATCCAGCATCGGAACCATCGGTGAGGCTATCACTGCGATCGACAACGGGGCCGACAGCGGCATGATTGCCAAATACCTGCCCAACGTCACAGAAGCCTCGGCATCCCTGAACAACGCAATGGATCGTATGGGGCTTGATGTGGTCGGGTCCGTCACGTTTGGTGCGCTGTCCGAGGGCGAACTGCGCCTCGCTATGAATACGGCGGTCCCGCGCGACCTTTCCCCGCCTGAATTGCGTAGCTGGCTGACGAAAAAGCAGGCGGCACAGCAGAAGGCGGCGACCATGTTGTCCGATGCCGCGCAATACCTGACAAGGCCGGGGAATACGATCAACGGGTGGATTGACAAGAATAAAGCATCTACCCCAATCGCTTCCCCAGAAGAAGCCGCCGCGCCATCTGCGGCAAGCTCATCCGCGCCGGATCAAGCACCTATCGACTTCACGTCAGACACCCCAATGCCGGGGCTGAGTGAAGATGACGCCGGTCTCTGGGGGTACGCGACCCCAGAAGAACGTCAAGCAATTTGGGGAAATTGA

Gene Ontology

Description Category Evidence (source)
GO:0004040 amidase activity molecular function None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1qpne) rather than this protein.
PDB ID
1qpne
Method AlphaFoldv2
Resolution 70.01
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50