Protein

Protein accession
A0A1C8HU77 [UniProt]
Representative
Tu28
Source
UniProt (cluster: phalp2_32425)
Protein name
Putative endolysin
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKLSEKRALFTQLLAQLILWAGTQDRVSVALDQVKRTQAEADANAKSGAGIRNSLHLLGLAGDLILYKDGKYMDKSEDYKFLGDYWKSLHPLCRWGGDFKSRPDGNHFSLEHEGVQ
Physico‐chemical
properties
protein length:116 AA
molecular weight:13051,0 Da
isoelectric point:7,87
hydropathy:-0,49
Representative Protein Details
Accession
Tu28
Protein name
Tu28
Sequence length
124 AA
Molecular weight
14043,45560 Da
Isoelectric point
5,57024
Sequence
VQLETKILADGLGFTLGESYRTAEQAAINSLSLYDRARIRAILETKYPVLADAIGSSTSRGIKNSVHRDKLAQDLNLYKDDKWLEDAADYLPYGEFWKSLHPLARWGGDFGDADHFSFEYNGRR
Other Proteins in cluster: phalp2_32425
Total (incl. this protein): 7 Avg length: 125,4 Avg pI: 7,09
Protein ID Length (AA) pI
Tu28 124 5,57024
42mfd 129 6,71873
4A2CY 137 6,36377
5Jzew 111 6,16091
7UTXc 145 9,06975
A0A1C8HUE2 116 7,87096
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_15708
3e9WP
 3293 40,3% 109 2.853E-23
2 phalp2_33191
4ZeoN
 11 30,4% 105 9.002E-12
3 phalp2_9971
37mep
 1 29,9% 117 1.521E-10

Domains

Domains [InterPro]
Unannotated
Representative sequence (used for alignment): Tu28 (124 AA)
Member sequence: A0A1C8HU77 (116 AA)
1 124 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaMx33
[NCBI] 		1815974 Fredfastierviridae > Jamesmcgillvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
KU884561 [NCBI]
CDS location
range 11479 -> 11829
strand +
CDS
GTGAAACTCAGCGAAAAACGAGCACTGTTCACCCAGCTGCTTGCCCAGTTAATTCTTTGGGCAGGAACTCAGGATCGAGTGTCAGTAGCCTTGGATCAAGTGAAAAGGACACAGGCTGAAGCTGATGCCAATGCTAAGTCTGGAGCAGGCATTAGGAATTCTCTTCATTTACTGGGACTAGCCGGCGATCTTATCCTCTACAAGGATGGTAAATATATGGATAAGAGCGAGGATTATAAGTTCCTGGGAGATTACTGGAAGAGTCTTCATCCTCTTTGTCGGTGGGGCGGAGATTTTAAAAGTCGCCCTGATGGTAATCACTTCTCCTTGGAACATGAAGGAGTGCAATAA

Gene Ontology

Description Category Evidence (source)
GO:0008233 peptidase activity molecular function None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
A0A1C8HQ03
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
A0A1C8HSS9
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
A0A1C8HU77
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
A0A1C8HUI7
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
A0A482JT65
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Showing first 5 of 9 structures.

The structures below correspond to the cluster representative (Tu28) rather than this protein.
PDB ID
Tu28
Method AlphaFoldv2
Resolution 96.71
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50