Protein

Protein accession
C7F460 [UniProt]
Representative
29R5d
Source
UniProt (cluster: phalp2_31142)
Protein name
Phage tail protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MTLTAFQMTDSRLRLLAMATLTLTVSGAAMALARQPIPQVPAAAASAPLTPPPPVPQHVALKPLADLVGDVESKSAGGYNAANNGYAMGLGSHGLSKHFGTDCKNISVGQIIKAQQRGWLYAVGRYQMIPSTLAFAVKHSPGITNYTFFTPETQDTLFLALLKHKRPAVWAYLNGKGSRDRALHALALEWAGLPGHHGYTLYPGNNASHTSVIRVRQVLEQTRQNFMDI
Physico‐chemical
properties
protein length:229 AA
molecular weight:24683,1 Da
isoelectric point:9,85
hydropathy:-0,07
Representative Protein Details
Accession
29R5d
Protein name
29R5d
Sequence length
213 AA
Molecular weight
23780,91840 Da
Isoelectric point
9,09689
Sequence
MFFLLQSVLTLTPFFDPSKIHYSESAKLLESTPKELPFNPKESTNVAELADLIGEVESDSVGGYNAANAGRAMDLGSNGLIKLTGRSCEEITIREIKALQRRGLLHAVGRYQIIPSTLRAAVKWAKLSEEEYFSPENQDKLLLALLQHKRPKVWQYIKTGHHLPTAINELAKEWAGIPTTSGHSYYGYGNRAHTTVAKVRAVLQQLRLNFSFA
Other Proteins in cluster: phalp2_31142
Total (incl. this protein): 53 Avg length: 249,0 Avg pI: 7,32
Protein ID Length (AA) pI
29R5d 213 9,09689
15WAq 297 5,14753
1AqHg 160 6,42897
1Ay7Y 219 8,79254
1B5WH 162 6,06849
1BahN 164 6,73402
1GAcH 208 6,96848
1Psa 218 8,81381
1RWuO 222 6,84179
1VaqK 208 9,47610
1tWN9 209 8,51416
1xkeL 212 6,83071
21V4l 252 8,89685
262gJ 236 5,83614
27bwe 384 5,06051
29tKp 218 8,81433
2I0JM 295 4,46251
2J1dK 295 4,46251
2PWZo 341 7,04010
2nj4V 206 5,85586
2s3Y7 247 7,92408
2s81j 211 9,29784
2uLNR 215 9,07704
2w8Nd 211 9,48396
2xznG 332 5,49823
32kKL 328 8,68359
3RHjW 245 4,96991
3aRf4 200 9,05583
4sncH 298 4,49246
4sqWR 207 9,12784
7BDCX 229 9,85027
7CGnX 295 4,66019
7WkDr 330 8,41553
7xznV 224 7,92776
82PaQ 330 6,69549
83OU2 272 5,72468
83mql 333 8,40521
85AS7 233 6,14108
85RZS 220 10,48915
86vIw 207 6,59107
86wKI 211 6,65263
86x24 206 5,94675
88iLI 212 6,28244
88kkS 206 6,20286
8CMr9 329 6,80570
8csZz 332 6,71544
8hrs7 272 6,06793
8yWkw 329 6,80393
do9z 236 9,49125
gIqq 211 6,96547
xDVs 324 7,67391
D1LV09 212 9,74841
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26241
yB01
 9 45,9% 172 1.921E-71
2 phalp2_25040
13Zu8
 10 39,7% 209 5.216E-62
3 phalp2_6423
8yy4P
 2 30,8% 217 1.259E-48
4 phalp2_31004
1n5Zt
 1 38,2% 157 1.543E-41
5 phalp2_11689
1R23y
 7 32,2% 220 3.548E-40
6 phalp2_25417
2DsQ1
 13 38,2% 175 4.277E-36
7 phalp2_6640
1zzMu
 1 36,8% 160 7.150E-35
8 phalp2_15120
8A926
 3 29,2% 195 1.827E-34
9 phalp2_39645
6MMi3
 2 31,6% 174 1.064E-32
10 phalp2_33521
6zTS
 1 25,2% 238 2.049E-27

Domains

Domains [InterPro]
Disordered region
Unannotated
Representative sequence (used for alignment): 29R5d (213 AA)
Member sequence: C7F460 (229 AA)
1 213 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage PSS2
[NCBI] 		658401 No lineage information
Host Prochlorococcus marinus str. MIT 9313
[NCBI] 		74547 Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
GQ334450 [NCBI]
CDS location
range 10792 -> 11481
strand +
CDS
TTGACCCTTACAGCTTTTCAAATGACTGATTCACGATTGAGGTTGCTGGCAATGGCCACCTTGACCTTGACGGTTTCTGGGGCAGCTATGGCATTAGCTAGGCAACCCATCCCTCAGGTTCCTGCAGCCGCTGCCAGCGCACCATTAACACCTCCACCCCCAGTTCCACAGCACGTAGCCCTCAAGCCCTTAGCGGACCTTGTGGGTGATGTAGAGAGCAAATCAGCAGGCGGATATAACGCAGCAAACAATGGCTATGCCATGGGCTTAGGTAGCCATGGACTTAGTAAGCACTTCGGTACTGACTGTAAGAACATCAGCGTTGGCCAGATCATCAAGGCCCAACAGCGTGGCTGGCTTTATGCAGTTGGTCGCTACCAGATGATCCCTTCCACATTGGCCTTTGCTGTTAAGCATTCGCCAGGCATCACCAACTACACCTTTTTCACACCAGAGACCCAAGACACCCTGTTCCTTGCCTTGCTGAAGCACAAACGCCCTGCAGTGTGGGCGTACCTCAATGGCAAAGGCTCTAGGGATCGTGCCCTACATGCATTGGCCCTCGAGTGGGCTGGTCTTCCTGGTCATCACGGTTACACCCTCTATCCAGGCAACAACGCATCACACACCTCAGTAATCAGAGTGCGTCAGGTACTCGAACAAACCCGCCAGAACTTTATGGATATTTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi0001b03fe3_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (29R5d) rather than this protein.
PDB ID
29R5d
Method AlphaFoldv2
Resolution 84.64
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50