Protein

Protein accession
L0CQ17 [UniProt]
Representative
1R6aU
Source
UniProt (cluster: phalp2_5127)
Protein name
Phage tail lysozyme domain-containing protein
Lysin probability
100%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MSHEQAAGAIGSIMVETGSQDLMNLDVVEKDAKAGRGMMQYTGPRRVAYDRARTEALRSGADPNSMAWQIKYMAEEYKGKHDPAPGKSLVSWSKPLEKFSSRKYASAAEAAKAFTGSAASGQGYLRPGKPHFDKRMSAAESVARAYAGRGALEPLKGAGVTPQVPSTPKPPQPLPSPSHGDPMGLMIRPTF
Physico‐chemical
properties
protein length:191 AA
molecular weight:20391,0 Da
isoelectric point:9,69
hydropathy:-0,60
Representative Protein Details
Accession
1R6aU
Protein name
1R6aU
Sequence length
296 AA
Molecular weight
32716,27150 Da
Isoelectric point
9,89140
Sequence
MPFRGVRKPLQGLLIASLVSLILLPSRGLSTGLLEGFFYKYLMAPRNFFAVKQSAELDYAWKYLTGGQVEKDSGGVIKKMTAEQAAGWLGSWIVESGKVDLKNTDVIEKGAGAGRGIGQYTGVRRTAYDKARVAALKNGENPNSIQWQMKYFVQEYLGKHDINKASNVGWTRIFENRPAKGTAAFFAQYFTGSEASGKGYFRPRIPHQEMRNDAAQQLFKLYQGPPVSAPAQTPVPVKKNLFQIPFLVNEVPQGPHTPLPAPGWNPGMIKAPGNPDYRPSPMWERILPTGVKTPFA
Other Proteins in cluster: phalp2_5127
Total (incl. this protein): 8 Avg length: 258,6 Avg pI: 9,83
Protein ID Length (AA) pI
1R6aU 296 9,89140
15l8A 256 9,88779
2ZPgY 295 9,91409
50voA 292 9,93382
5xive 259 9,83157
7B8tl 224 9,62044
FPgY 256 9,84672
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_14068
8qK0c
 83 58,2% 187 4.874E-80
2 phalp2_4618
4llWk
 2 46,3% 192 1.978E-63
3 phalp2_27572
5BHkk
 4 25,1% 187 6.283E-06

Domains

Domains [InterPro]
Disordered region 1
Unannotated
Disordered region 2
Representative sequence (used for alignment): 1R6aU (296 AA)
Member sequence: L0CQ17 (191 AA)
1 296 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage P60
[NCBI] 		2905923 Autographiviridae > Tiilvirus > Tiilvirus P60
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
AF338467 [NCBI]
CDS location
range 37925 -> 38500
strand +
CDS
ATGAGTCATGAGCAGGCTGCTGGTGCTATCGGATCCATCATGGTGGAGACTGGCTCCCAGGACCTGATGAACCTAGATGTGGTGGAGAAGGACGCCAAGGCTGGCCGAGGCATGATGCAATACACCGGACCCCGCCGGGTTGCTTATGACCGCGCACGCACAGAAGCGTTACGGTCTGGTGCCGATCCTAACTCGATGGCGTGGCAGATTAAGTATATGGCTGAGGAGTATAAGGGCAAGCATGACCCTGCTCCAGGTAAGTCCCTGGTGTCCTGGTCGAAGCCTCTGGAGAAGTTCTCCTCCCGCAAGTATGCATCTGCTGCTGAAGCTGCTAAGGCCTTCACAGGATCTGCTGCTAGTGGCCAGGGTTATCTACGCCCAGGTAAGCCCCACTTCGACAAGCGCATGAGTGCTGCTGAGAGTGTCGCACGCGCATACGCCGGGAGAGGTGCCTTGGAGCCCCTCAAAGGCGCGGGAGTGACCCCTCAGGTACCATCTACCCCAAAGCCCCCTCAGCCCCTTCCTAGCCCCTCTCACGGGGATCCAATGGGCCTTATGATTCGTCCTACATTCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi0002a814f7_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1R6aU) rather than this protein.
PDB ID
1R6aU
Method AlphaFoldv2
Resolution 66.62
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50