Protein

Protein accession
H6BHY0 [UniProt]
Representative
1RWMF
Source
UniProt (cluster: phalp2_22625)
Protein name
Lysozyme murein
Lysin probability
59%
PhaLP type
VAL
Probability: 99% (predicted by ML model)
Protein sequence
MAVAVSKSSKINFYKFVQVKEPTTGRGPGAVQEGKIAKALNSNTKAINNLGATVNSLAKVLTDLKKVAIIDLEREQKKQSSFKAKYADETDGKKKKSGFLGSVVGKAPKSFLENIIGMLGDLFKFYIGTKVLKWLGDPRNKESIKNIVEIIGKIGQFIWDWSSFGITNTIDGLYDLFKDDATWQERLIGFGKAIASIGAIVLGIRYLSNPTKIIRDIYGGVRALIGFVTGRGGGGGRRPRTRGGGAAKLLLGTAVTAAAGYGIYQSFQEPEYAQGGKVKRKASAGGWINGPMSGYPVSLDGGRSTSFIGHGREYVARKANGGAFVVPFNTPATQRMSGLTGQRISEAKRGGYKLPGFAQGGAVERPWWDKLGWFGGAAAEAQRMKKNPTGDTSKEPVAKKGQEKELIGAGLPAVIAGGKWALSKGYTVAEHPNFKKNKWTQMGPNTGVGYNENGGERVGGHSSGSLHYSNLAIDVTDWRPGDWKSRTAQLAEEAYKLRDKLKLTQIIHDGWGSWFFGGGKSGPGSKGHPSHLHLGFAGAKSEGIQGGSGAPAGGYGYSSLLNLIGKYESDSVGGYNAVNQGGADGGHTALGYSGDYRNAPFNGAKKSLTDMTVREIMEKQRDDGSLSDAQWKKSGKLHAVGRYQIIGKTLKSLVDRGVISPNDKFDKATQDKAGIALIKGRGNNMGALRSEWIGLQRASDKELSDAIKGIGGSYDSGAGGMGPGPGGVADAPKQTYTGTVLGSASRRGERFADDVGPGVGVMPGQTLGGGSVQQLQEMTQQRNDAKRQIVNHSQQVMQMVVAEVTQNNSTVGMLAQQALNTVSGLQQQGSQATPPMIVGGGGGNVGTIVKTTAAVLNSFNNPLKGILK
Physico‐chemical
properties
protein length:868 AA
molecular weight:91673,0 Da
isoelectric point:9,86
hydropathy:-0,42
Representative Protein Details
Accession
1RWMF
Protein name
1RWMF
Sequence length
896 AA
Molecular weight
95310,61870 Da
Isoelectric point
9,34767
Sequence
MATVIKKPAKINFYKFVKPETVRSSSTKVKKGNTVQLTKSINKNVLALNNLGTTLNSIANVLTDFVTTQQKLFDNIGKSVEPTFIPRYTGVKERDEESTGLVDNEIAEVKMPGFLEAIFNLVKDFLMLAIAKPALEWLSKEENREAIKRTVNVMVDLFKAVSGFVTDRVVGLIDNLYELFRDDKSWWEKIGDFFGAVVNFAGLFTAIRYLKNPLKLIDDLRDVLKGFAGGLKGAKKSLRGTLKRLGKAGMLVGAGLLLYNAIKGEDGEDGDDGDPGQDGANADTSSIEDALGEFAKGGPFGKYAKGGWISGPQSGYPVSLDGGKSTAFIGHGTEYVAQRAAGGFVIPLDTPATKTNPGLTQQRIGEAQGMGFDLGGMLKGFAAGGPTNQTSTERSTNRGTDRRDKGGGQKAVIGVGKAILKKGFTVAEHPNFTKNNYSGSGANTGKGFNPAGNSRVGGHSSGSAHYKNLAIDVTDWRAGDWLGRTKKLAQKVFENRKQFKLTQIIHDGWGSWFAGEGSKGAPYGGHPHHLHLAFADAMVKDGASRQPSTQPSGSQPANMGIVNSMGFTKEQWNIFRHTVADIESSGRYDIKGGSNNHYDGRYQLGAAAKTDGARHAGISDPGHSASAREKFRKDPKLQETLFAGFTKANHSYLMGVPEYKAASPERKLQILGYAHNQGMGGAEKWMKTGEVGADGFGTKGTKYTDAIAAAFKAKGKSAGGEDFTLDNVQIASDRGGSVAEDLTPAQRESSDSSSPSFSFSSDPTVAFGQLADQLSSAFGSGNGISADNSIIKDLQGAFAPLSSSSTSDLKQGTQNVESAKNDRRSAQAQVVAEMQKLAALQNQQTQAVAQQNLQQVASAQNAAASKKPQIVSTGGSTKSDLVSSLNSSNNPLKVFS
Other Proteins in cluster: phalp2_22625
Total (incl. this protein): 21 Avg length: 903,5 Avg pI: 9,65
Protein ID Length (AA) pI
1RWMF 896 9,34767
13WRD 974 9,67679
27Git 966 9,73687
2FG6K 902 9,32601
3BZDP 919 9,73887
4SzCG 851 8,89414
4uwrI 898 9,24678
8AB6Q 895 9,31041
8BBFa 919 9,73887
8Exvc 895 9,31041
8yA9g 895 9,31035
Aije 754 9,64326
A0A0E3FY13 997 9,98668
A0A1D7S9U5 868 9,86239
A0A482MLJ3 752 9,86394
A0A0E3F6W4 997 10,00325
A0A0E3HCI2 997 9,99519
A0A1D7S956 867 9,85504
A0A1D7SB26 867 9,86239
V5UU51 997 10,00325
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_40218
2qjSX
 23 41,6% 590 4.392E-167
2 phalp2_2818
8BNjQ
 22 27,6% 799 4.486E-71

Domains

Domains [InterPro]

No domain annotations available.

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM8 A.HR1
[NCBI] 		869724 Kyanoviridae > Neptunevirus > Neptunevirus srim18
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
JF974288 [NCBI]
CDS location
range 9069 -> 11675
strand +
CDS
ATGGCAGTAGCTGTATCAAAAAGTAGTAAAATTAATTTTTACAAGTTCGTTCAGGTAAAGGAACCTACGACTGGAAGGGGTCCTGGCGCTGTCCAAGAAGGAAAGATAGCAAAAGCACTTAATTCTAACACAAAAGCGATTAATAATCTAGGTGCCACTGTTAATTCACTGGCAAAGGTCTTGACAGACCTCAAAAAAGTCGCTATAATTGACCTTGAGAGGGAACAAAAGAAACAAAGCTCTTTCAAAGCTAAGTATGCCGACGAAACTGATGGTAAAAAGAAAAAGTCTGGTTTTCTTGGTAGTGTAGTTGGTAAGGCACCTAAGAGTTTCTTAGAAAATATCATAGGAATGCTTGGGGACTTATTTAAGTTCTATATTGGAACTAAAGTTCTTAAGTGGTTAGGTGACCCTAGAAATAAAGAGTCGATTAAAAATATTGTTGAGATTATCGGCAAGATTGGACAGTTTATTTGGGATTGGTCTAGTTTTGGTATTACCAATACAATTGATGGTCTTTATGACTTGTTCAAGGATGATGCAACTTGGCAAGAAAGATTAATTGGTTTTGGTAAAGCAATTGCTAGTATTGGTGCAATTGTTCTTGGCATTAGATATCTTTCCAATCCAACTAAAATTATCAGAGATATTTACGGTGGTGTTAGAGCATTAATCGGATTTGTTACTGGTAGAGGTGGTGGAGGTGGAAGGCGTCCAAGAACACGAGGAGGTGGAGCTGCTAAACTTTTACTAGGTACTGCAGTAACAGCAGCTGCTGGTTATGGTATCTATCAATCTTTCCAAGAACCTGAGTATGCTCAGGGAGGAAAGGTAAAGAGAAAAGCATCTGCGGGTGGGTGGATTAATGGTCCCATGTCTGGTTATCCAGTTTCTCTAGATGGTGGAAGAAGTACTTCATTTATTGGACATGGCAGAGAATATGTTGCACGCAAAGCAAATGGTGGAGCATTTGTAGTTCCTTTTAATACACCTGCAACTCAAAGGATGTCTGGTCTTACTGGACAAAGAATTTCTGAAGCTAAGAGGGGGGGTTATAAACTTCCTGGTTTCGCTCAAGGTGGTGCAGTCGAACGTCCTTGGTGGGATAAGCTTGGATGGTTTGGTGGAGCTGCTGCAGAGGCGCAGCGGATGAAAAAAAATCCAACTGGCGACACTTCAAAAGAACCTGTTGCGAAAAAAGGTCAAGAAAAGGAGCTTATTGGTGCTGGTCTTCCTGCTGTAATTGCTGGCGGCAAATGGGCATTATCCAAGGGATATACTGTTGCCGAACATCCAAACTTCAAAAAGAATAAATGGACTCAAATGGGTCCCAATACTGGAGTTGGTTATAACGAGAATGGTGGTGAACGTGTAGGTGGACACTCTTCTGGTTCTCTGCACTATAGTAATCTTGCTATTGATGTTACTGACTGGAGACCTGGGGACTGGAAATCAAGAACAGCGCAACTTGCTGAGGAAGCATATAAGTTAAGAGACAAATTAAAACTGACTCAGATTATTCATGATGGATGGGGTTCTTGGTTCTTTGGTGGAGGAAAGAGTGGTCCTGGTTCAAAGGGTCACCCGTCACATTTACATTTAGGATTTGCTGGTGCAAAGAGTGAAGGTATTCAGGGTGGTAGTGGTGCGCCTGCAGGCGGTTATGGATATAGTTCTCTATTGAATCTTATTGGTAAATATGAGTCTGACAGTGTTGGTGGATATAATGCCGTTAATCAAGGTGGTGCTGATGGCGGACATACTGCACTAGGTTATAGTGGAGACTATAGAAACGCACCTTTTAATGGTGCTAAAAAATCTTTAACTGATATGACTGTTAGAGAAATTATGGAGAAACAACGTGATGATGGAAGTTTATCGGATGCTCAGTGGAAGAAATCTGGTAAATTACATGCGGTTGGTAGATATCAAATTATCGGCAAAACATTAAAAAGTTTGGTTGATAGAGGTGTAATTAGTCCTAATGATAAATTTGATAAAGCAACTCAGGATAAAGCAGGTATTGCACTTATTAAAGGTCGTGGAAATAATATGGGAGCATTGAGGTCGGAATGGATTGGATTGCAGAGAGCATCCGATAAAGAACTATCCGATGCAATTAAAGGAATTGGTGGTTCTTATGATTCTGGCGCTGGAGGAATGGGACCAGGACCAGGAGGAGTTGCTGATGCACCAAAACAAACTTATACTGGAACAGTTCTTGGGTCTGCGTCCAGAAGGGGAGAAAGATTTGCTGATGATGTTGGACCAGGAGTCGGTGTGATGCCAGGTCAAACATTGGGTGGTGGCAGTGTTCAGCAACTCCAAGAAATGACACAGCAACGTAATGATGCAAAGAGGCAGATTGTGAATCATAGTCAGCAAGTTATGCAAATGGTCGTTGCTGAAGTTACTCAAAACAATAGTACTGTTGGTATGCTTGCTCAACAAGCACTCAATACAGTCTCTGGACTTCAGCAGCAAGGCAGTCAAGCAACACCACCTATGATTGTTGGCGGCGGTGGTGGTAATGTTGGAACTATTGTTAAGACAACTGCTGCAGTTCTAAATTCTTTCAACAACCCACTTAAAGGTATTCTAAAATGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi00024f35c3_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (1RWMF) rather than this protein.
PDB ID
1RWMF
Method AlphaFoldv2
Resolution 60.59
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50