Protein

Protein accession
A0A2H4P8Q9 [UniProt]
Representative
7ptMs
Source
UniProt (cluster: phalp2_36873)
Protein name
Lysin A
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MWYNTFMKYETLAKVMGNTLPMARYQELHPHYENAMRAANITNVNRAAMFAAQLRHESVGLKFMEEIASGAAYEGRSDLGNIYPGDGVRFKGRGPIQLTGRNNYRAFTQWANANGYSNIDFEAEPTKLSEPKWGFLAASYYWVVSRPNLNKWSDEKNVLNASREINGWVEKPNGLAERTNFFNEILAFGTALLPGDGDYMSTAAVLDYPRDQVAQDTYYNCGPASAQTVIRAKTGILLPEVDLGAELKTHEGGTDWIGQFPAVFSKHMPGSEYRSVEMPNDPPTQAQKDRLWDNIKNSIDAGYGVVANIVAPPSNYPRAVAPSTISPSYRGGTVYHYIAIMGYDSNSPDGIKAVWVADSGFDPFGYWMSFDQLATLIPPKGYAYSTATPIQNTIAEGLFMSLSPERQEDLANKIDRIYHELTHEFQSRYEKDGVQSEFRDTMMGYELEGDRKVEDIHANMLPEIYRVLLNIQGHTVDRKGK
Physico‐chemical
properties
protein length:481 AA
molecular weight:53985,9 Da
isoelectric point:5,41
hydropathy:-0,50
Representative Protein Details
Accession
7ptMs
Protein name
7ptMs
Sequence length
283 AA
Molecular weight
31308,57540 Da
Isoelectric point
7,76542
Sequence
MDAQTLREVMGSTLPDGGYTRLIDGYNNAMRAANVTTVERAAMFAAQLGHESVGLKYMREIASGAEYEGRRDLGNIYPGDGVRYAGRGPIQLTGRNNYRAFTRWAQANGHTTIDFEANPERLEEPHWGFLAASYYWVAARPQINSLCDRRDLEGVTRAINGGLNGLSDRRARYQRALTYGARLLPDGGKPPVEKVLDYSRDQVTQDTFYYCGPASSQTIIRSATGRVIAERDLAAQLGTTTNGTDWIGLFPAVLNRHLPGAGYRSVEMPNDPPSGEQKERLWA
Other Proteins in cluster: phalp2_36873
Total (incl. this protein): 9 Avg length: 457,4 Avg pI: 6,32
Protein ID Length (AA) pI
7ptMs 283 7,76542
A0A4Y6EME5 481 5,82869
A0A2H4P8D8 481 5,58070
A0A2H4P9D2 481 5,66539
A7IYC3 502 7,61804
A0A3G3LWH1 481 5,58684
A0A2H4P918 481 5,66539
A0A4Y6ENE9 446 7,73143
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28047
725I0
 68 70,4% 284 3.349E-148
2 phalp2_33778
19xgj
 53 54,9% 193 1.693E-84
3 phalp2_8241
7x5Zv
 42 51,3% 189 6.437E-64
4 phalp2_23279
520Od
 3 50,5% 178 1.322E-50
5 phalp2_1654
8rD3A
 4011 44,5% 175 9.900E-41
6 phalp2_23269
4XEAI
 9 42,8% 175 5.604E-39
7 phalp2_6233
6x5Zy
 12 43,8% 180 9.135E-38
8 phalp2_10052
7rxm7
 6 40,6% 177 3.995E-32
9 phalp2_23254
4Uvr8
 48 38,9% 213 8.709E-31
10 phalp2_82
4Uvd5
 73 36,4% 211 5.521E-30

Domains

Domains [InterPro]
Unannotated
Unannotated
Representative sequence (used for alignment): 7ptMs (283 AA)
Member sequence: A0A2H4P8Q9 (481 AA)
1 283 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage Darwin
[NCBI] 		2047869 Zierdtviridae > Ceetrepovirus > Corynebacterium virus Darwin
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
MG198777 [NCBI]
CDS location
range 32370 -> 33815
strand +
CDS
GTGTGGTATAATACCTTTATGAAATATGAGACTTTGGCGAAGGTAATGGGAAATACCCTCCCCATGGCTCGATACCAGGAGCTACACCCTCACTATGAAAATGCTATGAGGGCAGCGAACATCACGAACGTTAACCGGGCTGCGATGTTCGCTGCTCAGTTGCGCCACGAGTCTGTCGGCCTAAAGTTCATGGAGGAGATAGCCTCCGGAGCGGCGTATGAAGGTCGCAGTGACCTTGGAAATATCTACCCCGGAGATGGTGTTCGGTTTAAGGGGCGAGGCCCCATCCAGTTGACGGGCCGTAACAATTATCGAGCCTTTACCCAGTGGGCCAACGCAAATGGGTATTCTAACATTGATTTTGAGGCCGAACCAACGAAGCTATCTGAGCCTAAGTGGGGGTTTCTAGCCGCTTCCTATTATTGGGTTGTGTCTAGGCCAAACCTAAACAAGTGGTCTGACGAGAAGAACGTTCTCAATGCCTCCCGAGAAATTAATGGGTGGGTGGAGAAGCCTAACGGACTCGCAGAGAGAACCAACTTCTTTAACGAAATCCTGGCGTTCGGGACGGCTCTCCTACCAGGAGATGGAGACTATATGAGCACTGCTGCTGTACTTGACTATCCTAGAGACCAGGTAGCCCAAGACACCTACTATAACTGTGGACCGGCATCGGCACAGACAGTTATCCGCGCTAAGACTGGGATACTTCTTCCAGAGGTCGATCTCGGGGCCGAACTCAAGACCCATGAAGGCGGGACGGACTGGATCGGGCAATTCCCTGCCGTATTCAGTAAGCACATGCCCGGGTCAGAGTACAGGTCTGTAGAGATGCCTAATGACCCGCCGACGCAGGCGCAAAAGGATCGTCTGTGGGATAACATTAAAAACTCTATCGACGCGGGTTACGGCGTGGTGGCGAACATTGTTGCCCCGCCAAGCAACTATCCTCGTGCGGTCGCCCCGTCCACGATCTCCCCCTCATACAGGGGTGGGACAGTGTATCATTACATTGCTATTATGGGTTACGACTCGAATAGCCCGGACGGAATTAAGGCCGTATGGGTAGCCGACAGCGGGTTCGACCCATTCGGATACTGGATGTCGTTTGACCAGTTGGCTACGCTTATTCCTCCGAAGGGGTATGCCTACTCAACCGCAACCCCAATCCAAAACACTATTGCAGAAGGGCTTTTTATGTCTTTGTCTCCCGAGCGCCAGGAGGATCTGGCAAACAAGATCGACAGGATCTATCACGAACTTACTCACGAGTTCCAGTCTCGCTACGAGAAGGATGGGGTTCAGTCGGAATTCCGTGACACTATGATGGGATACGAATTGGAGGGTGACCGCAAGGTCGAGGATATTCATGCCAATATGCTTCCAGAGATTTATCGCGTTCTCCTGAATATCCAGGGACATACCGTTGACAGAAAGGGTAAGTAG

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
upi000ca0a451_model
Method AlphaFold3 (non-commercial)
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7ptMs) rather than this protein.
PDB ID
7ptMs
Method AlphaFoldv2
Resolution 93.55
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50