Protein

Protein accession
T1S9Y4 [UniProt]
Representative
2LjWy
Source
UniProt (cluster: phalp2_1761)
Protein name
Putative endolysin
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MDINQFRRASGINEQLAARWFPHITTAMNEFGITKPDDQAMFIAQVGHESGGFTRLQENFNYSVNGLSGFIRAGRITPDQANALGRKTYEKSLPLERQRAIANLVYSKRMGNNGPGDGWNYRGRGLIQITGLNNYRDCGNGLKVDLVAQPELLAQDEYAARSAAWFFSSKGCMKYTGDLVRVTQIINGGQNGIDDRRTRYAAARKVLAL
Physico‐chemical
properties
protein length:209 AA
molecular weight:23255,0 Da
isoelectric point:9,69
hydropathy:-0,49
Representative Protein Details
Accession
2LjWy
Protein name
2LjWy
Sequence length
205 AA
Molecular weight
22426,22270 Da
Isoelectric point
8,38819
Sequence
MDNNHFSQATGCHLSTAKVWRPVLVAEMEKAGIRERLDVCMLLALSAANTEEFSRVSEEFNYSSGELRRLFPGKFSPYQASMLGYQMLEKEIPISRQRAIANLSYGGRAGNTDKEDGWNFRSRGLLPVRGRRAYSELSGLVAVDLIANPDELLEPEIAARAACALFVARGGAGVRNASVAACLFGLSDDAHSVVQANYRRARAAL
Other Proteins in cluster: phalp2_1761
Total (incl. this protein): 7 Avg length: 209,0 Avg pI: 9,02
Protein ID Length (AA) pI
2LjWy 205 8,38819
3dEw9 208 7,85929
6SnRy 206 9,20868
A0A193GYJ3 208 9,56474
A0A7D7JZC2 208 9,62160
A0AA96NHX2 219 8,78261
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_24838
7taBM
 21 28,5% 189 2.594E-49
2 phalp2_22433
K5Pz
 97 30,5% 170 1.020E-43
3 phalp2_37433
2Fv3r
 11643 29,5% 193 2.357E-42
4 phalp2_12287
7e8ZJ
 95 32,9% 161 8.232E-39
5 phalp2_10067
7wmbf
 22 34,2% 187 1.541E-38
6 phalp2_2766
23eb
 36 35,9% 153 1.893E-37
7 phalp2_5234
8cPFI
 3482 28,0% 203 2.552E-34
8 phalp2_36134
6NUh4
 42 28,6% 192 6.528E-34
9 phalp2_16306
5aCST
 92 32,5% 169 7.132E-32
10 phalp2_23254
4Uvr8
 48 30,2% 172 1.823E-31

Domains

Domains [InterPro]
Unannotated
Representative sequence (used for alignment): 2LjWy (205 AA)
Member sequence: T1S9Y4 (209 AA)
1 205 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPC32H
[NCBI] 		1327941 Uetakevirus > Uetakevirus SPN1S
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
KC911856 [NCBI]
CDS location
range 25591 -> 26220
strand +
CDS
ATGGACATTAACCAGTTCCGGCGCGCATCCGGTATCAATGAGCAACTGGCCGCGCGCTGGTTTCCGCATATTACTACTGCCATGAATGAGTTTGGCATTACCAAACCAGATGACCAGGCAATGTTTATCGCACAGGTCGGGCATGAGTCCGGAGGATTTACCCGGTTACAGGAAAACTTTAACTACAGCGTTAACGGACTGTCCGGGTTTATCCGTGCCGGGCGCATCACTCCAGACCAGGCCAACGCACTTGGCCGGAAAACATATGAGAAGTCTCTTCCTCTGGAACGCCAGCGCGCGATCGCCAATCTTGTTTACAGCAAGCGCATGGGAAATAACGGCCCGGGCGACGGGTGGAATTATCGCGGTCGTGGACTTATCCAGATCACTGGTCTGAACAACTACCGGGATTGCGGTAATGGTCTGAAGGTTGATCTAGTCGCTCAGCCTGAACTGCTGGCGCAGGATGAATACGCGGCCAGAAGCGCGGCATGGTTCTTCTCCAGTAAAGGTTGCATGAAGTACACCGGTGACCTGGTGCGCGTCACGCAGATTATCAATGGTGGCCAGAACGGTATCGACGACCGGCGTACGCGTTACGCCGCTGCCCGTAAGGTGCTGGCGTTATGA

Gene Ontology

Description Category Evidence (source)
GO:0004568 chitinase activity molecular function None (UniProt)
GO:0006032 chitin catabolic process biological process None (UniProt)
GO:0016998 cell wall macromolecule catabolic process biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
4OK7
Method PDB
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
H2D0G4
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
M1F227
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
T1S9Y4
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
T1SBJ3
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Showing first 5 of 6 structures.

The structures below correspond to the cluster representative (2LjWy) rather than this protein.
PDB ID
2LjWy
Method AlphaFoldv2
Resolution 96.58
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50